Co‐Existence Slows Diversification in Experimental Populations of <i>E. coli</i> and <i>P. fluorescens</i>

Microbes grown in heterogeneous laboratory environments can rapidly diversify into multiple, coexisting variants. While the genetic and evolutionary mechanisms of laboratory adaptive radiations are well studied, how the presence of other species alters the outcomes of diversification is less well understood. To test the effect of co-culture growth on the Pseudomonas fluorescens SBW25 adaptive radiation, Escherichia coli and P. fluorescens were cultured in monoculture and co-culture for 8 weeks. In P. fluorescens monoculture, Wrinkly and Smooth Spreader types rapidly evolved and were maintained over 8 weeks, while E. coli monocultures evolved two colony types, a big and a small colony variant. In contrast, we found that in co-culture, E. coli did not evolve small colony variants. Whole genome sequencing revealed the genetic basis of possible co-culture specific adaptations in both E. coli and P. fluorescens. Altogether, our data support that the presence of multiple species changed the outcome of adaptive radiation.

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Publication Details

Journal
Environmental Microbiology
Published
2025-02-01
DOI
https://doi.org/10.1111/1462-2920.70061
Citations
3
Primary Topic
Evolution and Genetic Dynamics
Type
article
Field-Weighted Citation Impact
5.45

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article

Co‐Existence Slows Diversification in Experimental Populations of E. coli and P. fluorescens

Christopher Blake, Aysha L. Sezmis, Michael J. McDonald, Gareth Howells
3 citations
Environmental Microbiology
Evolution and Genetic Dynamics
5.45
article

Co‐Existence Slows Diversification in Experimental Populations of E. coli and P. fluorescens

Christopher Blake, Aysha L. Sezmis, Michael J. McDonald, Gareth Howells
article en
3 citations

Abstract

Microbes grown in heterogeneous laboratory environments can rapidly diversify into multiple, coexisting variants. While the genetic and evolutionary mechanisms of laboratory adaptive radiations are well studied, how the presence of other species alters the outcomes of diversification is less well understood. To test the effect of co-culture growth on the Pseudomonas fluorescens SBW25 adaptive radiation, Escherichia coli and P. fluorescens were cultured in monoculture and co-culture for 8 weeks. In P. fluorescens monoculture, Wrinkly and Smooth Spreader types rapidly evolved and were maintained over 8 weeks, while E. coli monocultures evolved two colony types, a big and a small colony variant. In contrast, we found that in co-culture, E. coli did not evolve small colony variants. Whole genome sequencing revealed the genetic basis of possible co-culture specific adaptations in both E. coli and P. fluorescens. Altogether, our data support that the presence of multiple species changed the outcome of adaptive radiation.

Environmental MicrobiologyVol. 27(2)
Monash University (AU)
Monash University, Medical Research Council, Australian Research Council, National Health and Medical Research Council
Life in Land
Openalex Percentile: Top 5%
Evolution and Genetic Dynamics
5.45
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