MORE-Q, a dataset for molecular olfactorial receptor engineering by quantum mechanics
We introduce the MORE-Q dataset, a quantum-mechanical (QM) dataset encompassing the structural and electronic data of non-covalent molecular sensors formed by combining 18 mucin-derived olfactorial receptors with 102 body odor volatilome (BOV) molecules. To have a better understanding of their intra- and inter-molecular interactions, we have performed accurate QM calculations in different stages of the sensor design and, accordingly, MORE-Q splits into three subsets: i) MORE-Q-G1: QM data of 18 receptors and 102 BOV molecules, ii) MORE-Q-G2: QM data of 23,838 BOV-receptor configurations, and iii) MORE-Q-G3: QM data of 1,836 BOV-receptor-graphene systems. Each subset involves geometries optimized using GFN2-xTB with D4 dispersion correction and up to 39 physicochemical properties, including global and local properties as well as binding features, all computed at the tightly converged PBE+D3 level of theory. By addressing BOV-receptor-graphene systems from a QM perspective, MORE-Q can serve as a benchmark dataset for state-of-the-art machine learning methods developed to predict binding features. This, in turn, can provide valuable insights for developing the next-generation mucin-derived olfactory receptor sensing devices.
Authors
- Gianaurelio Cuniberti (ORCID: https://orcid.org/0000-0002-6574-7848)
- Arezoo Dianat (ORCID: https://orcid.org/0000-0002-9246-6224)
- Shlomo Yitzchaik (ORCID: https://orcid.org/0000-0001-5021-5139)
- Nina Tverdokhleb (ORCID: https://orcid.org/0000-0002-2335-0260)
- Leonardo Medrano Sandonas (ORCID: https://orcid.org/0000-0002-7673-3142)
- Alexander Croy (ORCID: https://orcid.org/0000-0001-9296-9350)
- Rafael Gutiérrez (ORCID: https://orcid.org/0000-0001-8121-8041)
- Mattan Hurevich (ORCID: https://orcid.org/0000-0002-1038-8104)
- Philipp Traber (ORCID: https://orcid.org/0000-0003-3392-2573)
- Li Chen (ORCID: https://orcid.org/0000-0002-9650-497X)
Institutions
- Hebrew University of Jerusalem (IL)
- Max Bergmann Zentrum für Biomaterialien (DE)
- Center for Systems Biology Dresden (DE)
- Friedrich Schiller University Jena (DE)
- Technische Universität Dresden (DE)
Publication Details
- Journal
- Scientific Data
- Published
- 2025-02-22
- DOI
- https://doi.org/10.1038/s41597-025-04616-6
- Citations
- 5
- Primary Topic
- Olfactory and Sensory Function Studies
- Type
- article
- Field-Weighted Citation Impact
- 7.32
Funders
- Volkswagen Foundation
- Bundesministerium für Bildung und Forschung
- Horizon 2020 Framework Programme