Draft genome sequence of the fungal pathogen Penicillium expansum (PPRI25879) isolated in South Africa

Here, we describe the genome sequence of Penicillium expansum isolate PPRI25879, one of the most virulent strains isolated from grapes in South Africa. Sequencing reads from P. expansum produced approximately 3.5 Gb. The assembly generated a draft genome of size 32.1 Mb, consisting of 1648 contigs, with an N50 of 508 KB. Examination of the genome completeness with Benchmarking Universal Single-Copy Orthologs (BUSCO) showed the draft genome carries 97.9% of the 746 genes in the Eurotiomycetes_odb10 database. The draft genome sequence will allow improved genomic comparisons among the most important pathogens belonging to the Penicillium genus, with the aim of improving our knowledge of their plant-pathogen interactions, population biology, and control.

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Publication Details

Journal
BMC Genomic Data
Published
2025-02-21
DOI
https://doi.org/10.1186/s12863-025-01299-1
Primary Topic
Plant Pathogens and Fungal Diseases
Type
article
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article

Draft genome sequence of the fungal pathogen Penicillium expansum (PPRI25879) isolated in South Africa

Molemi Rauwane, Khayalethu Ntushelo, Sandiswa Figlan, Wai-Yin Chan
BMC Genomic Data
Plant Pathogens and Fungal Diseases
article

Draft genome sequence of the fungal pathogen Penicillium expansum (PPRI25879) isolated in South Africa

Molemi Rauwane, Khayalethu Ntushelo, Sandiswa Figlan, Wai-Yin Chan
article en

Abstract

Here, we describe the genome sequence of Penicillium expansum isolate PPRI25879, one of the most virulent strains isolated from grapes in South Africa. Sequencing reads from P. expansum produced approximately 3.5 Gb. The assembly generated a draft genome of size 32.1 Mb, consisting of 1648 contigs, with an N50 of 508 KB. Examination of the genome completeness with Benchmarking Universal Single-Copy Orthologs (BUSCO) showed the draft genome carries 97.9% of the 746 genes in the Eurotiomycetes_odb10 database. The draft genome sequence will allow improved genomic comparisons among the most important pathogens belonging to the Penicillium genus, with the aim of improving our knowledge of their plant-pathogen interactions, population biology, and control.

BMC Genomic DataVol. 26(1)
University of South Africa (ZA), University of the Witwatersrand (ZA), Nelson Mandela University (ZA)
Life in Land
Openalex Percentile: Top 96%
Plant Pathogens and Fungal Diseases
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Draft genome sequence of the fungal pathogen Penicillium expansum (PPRI25879) isolated in South Africa — Molemi Rauwane, Khayalethu Ntushelo, et al. · BMC Genomic Data (2025) | TGRS Research Map | TGRS