cDNA Cloning, Bioinformatics, and Expression Analysis of ApsANS in Acer pseudosieboldianum

Anthocyanin synthetase (ANS), a key enzyme in the final step of the anthocyanin synthesis pathway, catalyzes the conversion of leucoanthocyanidins to anthocyanins. In this study, an ANS structural protein (TRINITY_DN18024_c0_g1) was found to be associated with anthocyanin accumulation in <i>Acer pseudosieboldianum</i> leaves, named <i>ApsANS</i>. Real-time quantitative fluorescence PCR analysis revealed that the expression of <i>ApsANS</i> was significantly higher in red-leaved (variant) than green-leaved (wild-type) strains, which was consistent with the transcriptome data. The UPLC results showed that the cyanidin metabolites may be the key substance influencing the final color formation of <i>Acer pseudosieboldianum</i>. The <i>ApsANS</i> gene was cloned and analyzed through bioinformatics analysis. <i>ApsANS</i> has a total length of 1371 bp, and it encodes 360 amino acids. Analysis of the structural domain of the <i>ApsANS</i> protein revealed that <i>ApsANS</i> contains a PcbC functional domain. Protein secondary structure predictions indicate that α-helix, irregularly coiled, and extended chains are the major building blocks. Subcellular localization predicted that <i>ApsANS</i> might be localized in the nucleus. The phylogenetic tree revealed that <i>ApsANS</i> is relatively closely related to <i>ApANS</i> in <i>Acer palmatum</i>. The prediction of miRNA showed that the <i>ApsANS</i> gene is regulated by miR6200. This study provides a theoretical reference for further analyzing the regulatory mechanism of leaf color formation in <i>Acer pseudosieboldianum</i>.

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Journal
International Journal of Molecular Sciences
Published
2025-02-21
DOI
https://doi.org/10.3390/ijms26051865
Citations
1
Primary Topic
Plant Gene Expression Analysis
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article
Field-Weighted Citation Impact
0.81

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article

cDNA Cloning, Bioinformatics, and Expression Analysis of ApsANS in Acer pseudosieboldianum

Yufu Gao, Jiayi Ye, Zhen‐Hui Gong, Li-Ping Rong et al.
1 citations
International Journal of Molecular Sciences
Plant Gene Expression Analysis
0.81
article

cDNA Cloning, Bioinformatics, and Expression Analysis of ApsANS in Acer pseudosieboldianum

Yufu Gao, Jiayi Ye, Zhen‐Hui Gong, Li-Ping Rong, Zhuo Weng, Xiaoyü Li, Mingrui Li
article en
1 citations

Abstract

Anthocyanin synthetase (ANS), a key enzyme in the final step of the anthocyanin synthesis pathway, catalyzes the conversion of leucoanthocyanidins to anthocyanins. In this study, an ANS structural protein (TRINITY_DN18024_c0_g1) was found to be associated with anthocyanin accumulation in <i>Acer pseudosieboldianum</i> leaves, named <i>ApsANS</i>. Real-time quantitative fluorescence PCR analysis revealed that the expression of <i>ApsANS</i> was significantly higher in red-leaved (variant) than green-leaved (wild-type) strains, which was consistent with the transcriptome data. The UPLC results showed that the cyanidin metabolites may be the key substance influencing the final color formation of <i>Acer pseudosieboldianum</i>. The <i>ApsANS</i> gene was cloned and analyzed through bioinformatics analysis. <i>ApsANS</i> has a total length of 1371 bp, and it encodes 360 amino acids. Analysis of the structural domain of the <i>ApsANS</i> protein revealed that <i>ApsANS</i> contains a PcbC functional domain. Protein secondary structure predictions indicate that α-helix, irregularly coiled, and extended chains are the major building blocks. Subcellular localization predicted that <i>ApsANS</i> might be localized in the nucleus. The phylogenetic tree revealed that <i>ApsANS</i> is relatively closely related to <i>ApANS</i> in <i>Acer palmatum</i>. The prediction of miRNA showed that the <i>ApsANS</i> gene is regulated by miR6200. This study provides a theoretical reference for further analyzing the regulatory mechanism of leaf color formation in <i>Acer pseudosieboldianum</i>.

International Journal of Molecular SciencesVol. 26(5)
Yanbian University (CN)
National Natural Science Foundation of China
Life in Land
Openalex Percentile: Top 31%
Plant Gene Expression Analysis
0.81
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cDNA Cloning, Bioinformatics, and Expression Analysis of ApsANS in Acer pseudosieboldianum — Yufu Gao, Jiayi Ye, et al. · International Journal of Molecular Sciences (2025) | TGRS Research Map | TGRS