In silico identification and analysis of paralogs encoding enzymes of carbohydrate metabolism in Drosophila melanogaster

The identification and characterization of gene paralogs is crucial to understand the functional contribution of individual genes/proteins to biological pathways. Here, we have identified 51 genes belonging to fifteen paralogous groups encoding enzymes involved in carbohydrate metabolism in <i>Drosophila melanogaster</i> . Strikingly, most paralogous groups comprise a single 'canonical' enzyme that is expressed ubiquitously and one or more variants expressed predominantly in the testis. Most of these testis-specific forms are predicted to be catalytically inactive, suggesting they may have adopted regulatory roles. This work will aid the planning and interpretation of experimental studies of several Drosophila metabolic pathways, including glycolysis, gluconeogenesis and the pentose phosphate pathway.

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Journal
PubMed
Published
2024-11-19
DOI
https://doi.org/10.17912/micropub.biology.001425
Citations
1
Primary Topic
Glycosylation and Glycoproteins Research
Type
article
Field-Weighted Citation Impact
0.23

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article

In silico identification and analysis of paralogs encoding enzymes of carbohydrate metabolism in Drosophila melanogaster

Steven J Marygold, Rossana Zaru
1 citations
PubMed
Glycosylation and Glycoproteins Research
0.23
article

In silico identification and analysis of paralogs encoding enzymes of carbohydrate metabolism in Drosophila melanogaster

Steven J Marygold, Rossana Zaru
article en
1 citations

Abstract

The identification and characterization of gene paralogs is crucial to understand the functional contribution of individual genes/proteins to biological pathways. Here, we have identified 51 genes belonging to fifteen paralogous groups encoding enzymes involved in carbohydrate metabolism in <i>Drosophila melanogaster</i> . Strikingly, most paralogous groups comprise a single 'canonical' enzyme that is expressed ubiquitously and one or more variants expressed predominantly in the testis. Most of these testis-specific forms are predicted to be catalytically inactive, suggesting they may have adopted regulatory roles. This work will aid the planning and interpretation of experimental studies of several Drosophila metabolic pathways, including glycolysis, gluconeogenesis and the pentose phosphate pathway.

PubMedVol. 2025
University of Cambridge (GB)
National Institute of Diabetes and Digestive and Kidney Diseases
Openalex Percentile: Top 39%
Glycosylation and Glycoproteins Research
0.23
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In silico identification and analysis of paralogs encoding enzymes of carbohydrate metabolism in Drosophila melanogaster — Steven J Marygold, Rossana Zaru · PubMed (2024) | TGRS Research Map | TGRS