Whole-Genome Sequencing of Extended-Spectrum β-Lactamase-Producing Klebsiella pneumoniae Isolated from Human Bloodstream Infections

<i>Klebsiella pneumoniae</i> is a Gram-negative bacterium commonly associated with bloodstream infections (BSIs), which can lead to severe clinical outcomes, especially in immunocompromised individuals or patients with underlying health conditions. The increasing prevalence of <i>K. pneumoniae</i> that produces extended-spectrum β-lactamases (ESBL) poses a significant challenge for treatment and infection control, necessitating a swift diagnostic approach and tailored antimicrobial therapy to improve patient outcomes. A total of 32 <i>K. pneumoniae</i> isolates were recovered from BSIs from December 2021 to August 2022. Whole-genome sequencing (WGS) was performed on the 14 ESBL-producing isolates. All ESBL isolates carried the <i>bla</i><sub>CTX-M-15</sub> gene, together with other β-lactamase-encoding genes (<i>bla</i><sub>TEM-1</sub>, <i>bla</i><sub>SHV-28</sub>, <i>bla</i><sub>SHV-26</sub>, or <i>bla</i><sub>OXA-1</sub>). Three of the isolates also carried the <i>bla</i><sub>KPC-3</sub> gene. Resistance genes to quinolones, sulfonamides, tetracycline, aminoglycosides, and chloramphenicol were also detected. We can conclude that the presence of ESBL-producing isolates among <i>K. pneumoniae</i> of BSIs raises concerns, since these enzymes limit the available treatment options, and future research must include studies on alternative therapies for dealing with resistant bacterial infections and developing new approaches to disease treatment.

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Publication Details

Journal
Pathogens
Published
2025-02-20
DOI
https://doi.org/10.3390/pathogens14030205
Citations
3
Primary Topic
Antibiotic Resistance in Bacteria
Type
article
Field-Weighted Citation Impact
1.77

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article

Whole-Genome Sequencing of Extended-Spectrum β-Lactamase-Producing Klebsiella pneumoniae Isolated from Human Bloodstream Infections

Sara Sousa, Carolina Sabença, Gilberto Igrejas, Vanessa Silva et al.
3 citations
Pathogens
Antibiotic Resistance in Bacteria
1.77
article

Whole-Genome Sequencing of Extended-Spectrum β-Lactamase-Producing Klebsiella pneumoniae Isolated from Human Bloodstream Infections

Sara Sousa, Carolina Sabença, Gilberto Igrejas, Vanessa Silva, Manuela Caniça, Eliana Costa, Patrícia Poeta, Cármen Torres, Rani de la Rivière
article en
3 citations

Abstract

<i>Klebsiella pneumoniae</i> is a Gram-negative bacterium commonly associated with bloodstream infections (BSIs), which can lead to severe clinical outcomes, especially in immunocompromised individuals or patients with underlying health conditions. The increasing prevalence of <i>K. pneumoniae</i> that produces extended-spectrum β-lactamases (ESBL) poses a significant challenge for treatment and infection control, necessitating a swift diagnostic approach and tailored antimicrobial therapy to improve patient outcomes. A total of 32 <i>K. pneumoniae</i> isolates were recovered from BSIs from December 2021 to August 2022. Whole-genome sequencing (WGS) was performed on the 14 ESBL-producing isolates. All ESBL isolates carried the <i>bla</i><sub>CTX-M-15</sub> gene, together with other β-lactamase-encoding genes (<i>bla</i><sub>TEM-1</sub>, <i>bla</i><sub>SHV-28</sub>, <i>bla</i><sub>SHV-26</sub>, or <i>bla</i><sub>OXA-1</sub>). Three of the isolates also carried the <i>bla</i><sub>KPC-3</sub> gene. Resistance genes to quinolones, sulfonamides, tetracycline, aminoglycosides, and chloramphenicol were also detected. We can conclude that the presence of ESBL-producing isolates among <i>K. pneumoniae</i> of BSIs raises concerns, since these enzymes limit the available treatment options, and future research must include studies on alternative therapies for dealing with resistant bacterial infections and developing new approaches to disease treatment.

PathogensVol. 14(3)
University of Trás-os-Montes and Alto Douro (PT), Universidad de La Rioja (ES), Universidade do Porto (PT), Unidade Local de Saúde de Trás-os-Montes e Alto Douro (PT), Rede de Química e Tecnologia (PT), National Institute of Health Dr. Ricardo Jorge (PT), LAQV Requimte (PT)
Fundação para a Ciência e a Tecnologia
Good health and well-being
Openalex Percentile: Top 17%
Antibiotic Resistance in Bacteria
1.77
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