AI Model for Predicting Anti-PD1 Response in Melanoma Using Multi-Omics Biomarkers

We demonstrated that models using only RNA-seq or multi-omics biomarkers outperformed nsTMB in predicting the response of melanoma patients to ICI. Furthermore, our machine learning approach improves clinical usability by providing explanations of its predictions on a per-patient basis. Our findings underscore the utility of multi-omics data for selecting patients for treatment with anti-PD1 drugs. However, to train clinical-grade AI models for routine applications, prospective studies collecting larger melanoma cohorts with consistent application of exome and RNA sequencing are required.

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Publication Details

Journal
Cancers
Published
2025-02-20
DOI
https://doi.org/10.3390/cancers17050714
Citations
14
Primary Topic
Computational Drug Discovery Methods
Type
article
Field-Weighted Citation Impact
21.06
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article

AI Model for Predicting Anti-PD1 Response in Melanoma Using Multi-Omics Biomarkers

Axel Gschwind, Stephan Ossowski
14 citations
Cancers
Computational Drug Discovery Methods
21.06
article

AI Model for Predicting Anti-PD1 Response in Melanoma Using Multi-Omics Biomarkers

Axel Gschwind, Stephan Ossowski
article en
14 citations

Abstract

We demonstrated that models using only RNA-seq or multi-omics biomarkers outperformed nsTMB in predicting the response of melanoma patients to ICI. Furthermore, our machine learning approach improves clinical usability by providing explanations of its predictions on a per-patient basis. Our findings underscore the utility of multi-omics data for selecting patients for treatment with anti-PD1 drugs. However, to train clinical-grade AI models for routine applications, prospective studies collecting larger melanoma cohorts with consistent application of exome and RNA sequencing are required.

CancersVol. 17(5)
University of Tübingen (DE)
Openalex Percentile: Top 1%
Computational Drug Discovery Methods
21.06
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