Model-based iterative reconstruction with adaptive regularization for artifact reduction in electron tomography

Obtaining high-quality 3D reconstructions from electron tomography of crystalline particles embedded in lighter support elements is crucial for various material systems such as catalysts for fuel cell applications. However, significant challenges arise due to the limited tilt range, sparse and low signal-to-noise ratio of the measurements. In addition, small metal particles can cause strong streaking and shading artifacts in the 3D reconstructions when using conventional reconstruction algorithms due to the presence of Bragg diffraction and the large scattering cross-section difference between the materials of the particles and the background support regions. These artifacts lead to errors in the downstream characterization affecting extraction of critical features such as the size of the metal particles, their distribution and the volume of the lighter support regions. In this paper, we present a two-stage algorithm based on metal artifact reduction, utilizing model-based iterative reconstruction methods with adaptive adjustment of regularization parameters. Our approach yields high-quality 3D reconstructions compared to traditional algorithms, accurately capturing both the metal particles as well as the background support. We demonstrate the effectiveness of our algorithm through simulated and experimental bright-field electron tomography data, showing significant improvements in reconstruction quality compared to traditional methods.

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Publication Details

Journal
Scientific Reports
Published
2025-02-18
DOI
https://doi.org/10.1038/s41598-025-86639-y
Citations
1
Primary Topic
Advanced Electron Microscopy Techniques and Applications
Type
article
Field-Weighted Citation Impact
2.55

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Model-based iterative reconstruction with adaptive regularization for artifact reduction in electron tomography

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article

Model-based iterative reconstruction with adaptive regularization for artifact reduction in electron tomography

José David Arregui-Mena, Lynda Amichi, Amirkoushyar Ziabari, Obaidullah Rahman, Singanallur Venkatakrishnan, David A. Cullen, Haoran Yu
article en
1 citations

Abstract

Obtaining high-quality 3D reconstructions from electron tomography of crystalline particles embedded in lighter support elements is crucial for various material systems such as catalysts for fuel cell applications. However, significant challenges arise due to the limited tilt range, sparse and low signal-to-noise ratio of the measurements. In addition, small metal particles can cause strong streaking and shading artifacts in the 3D reconstructions when using conventional reconstruction algorithms due to the presence of Bragg diffraction and the large scattering cross-section difference between the materials of the particles and the background support regions. These artifacts lead to errors in the downstream characterization affecting extraction of critical features such as the size of the metal particles, their distribution and the volume of the lighter support regions. In this paper, we present a two-stage algorithm based on metal artifact reduction, utilizing model-based iterative reconstruction methods with adaptive adjustment of regularization parameters. Our approach yields high-quality 3D reconstructions compared to traditional algorithms, accurately capturing both the metal particles as well as the background support. We demonstrate the effectiveness of our algorithm through simulated and experimental bright-field electron tomography data, showing significant improvements in reconstruction quality compared to traditional methods.

Scientific ReportsVol. 15(1)
Oak Ridge National Laboratory (US)
U.S. Department of Energy, Office of Science, Office of Energy Efficiency and Renewable Energy, Fundação para a Ciência e a Tecnologia, Hydrogen and Fuel Cell Technologies Office, Office of Energy Efficiency, Oak Ridge National Laboratory
Sustainable cities and communities
Openalex Percentile: Top 11%
Advanced Electron Microscopy Techniques and Applications
2.55
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