Evaluation of two new antibodies for recognition of CldU in DNA fiber assay applications

DNA fiber assays are indispensable tools for studying DNA damage and replication stress responses <i>in vivo</i> at the single replication fork level. These assays typically rely on antibodies recognizing IdU and CldU. Historically, the availability of CldU-reactive antibodies has been limited to one reagent (clone BU1/75(ICR1)). We validated two alternative antibodies for CldU detection in DNA fiber assays. One of these antibodies can be readily paired with a common IdU-reactive antibody, and we confirmed that it produces quantitatively similar CldU track length results vis-à-vis the BU1/75 antibody. The new reagents should boost versatility of DNA fiber assays, facilitating DNA replication research.

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Publication Details

Journal
PubMed
Published
2024-12-30
DOI
https://doi.org/10.17912/micropub.biology.001485
Primary Topic
Biosensors and Analytical Detection
Type
article
Field-Weighted Citation Impact
0.00

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article

Evaluation of two new antibodies for recognition of CldU in DNA fiber assay applications

Anissa A. Widjaja, Julia M. Sidorova
PubMed
Biosensors and Analytical Detection
article

Evaluation of two new antibodies for recognition of CldU in DNA fiber assay applications

Anissa A. Widjaja, Julia M. Sidorova
article en

Abstract

DNA fiber assays are indispensable tools for studying DNA damage and replication stress responses <i>in vivo</i> at the single replication fork level. These assays typically rely on antibodies recognizing IdU and CldU. Historically, the availability of CldU-reactive antibodies has been limited to one reagent (clone BU1/75(ICR1)). We validated two alternative antibodies for CldU detection in DNA fiber assays. One of these antibodies can be readily paired with a common IdU-reactive antibody, and we confirmed that it produces quantitatively similar CldU track length results vis-à-vis the BU1/75 antibody. The new reagents should boost versatility of DNA fiber assays, facilitating DNA replication research.

PubMedVol. 2025
University of Washington (US), University of Washington Applied Physics Laboratory (US), New York Genome Center (US)
National Institute of General Medical Sciences
Openalex Percentile: Top 75%
Biosensors and Analytical Detection
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