LOPAC library screening identifies suramin as a TRIM21 binder with a unique binding mode revealed by crystal structure

Differential scanning fluorimetry screening of the Library of Pharmacologically Active Compounds (LOPAC) identified four hits for the PRYSPRY domain of the human E3 ligase tripartite motif-containing protein 21 (TRIM21). Isothermal titration calorimetry subsequently confirmed suramin as a binder with micromolar affinity. To further investigate the binding mechanism, mouse TRIM21 was used as a structural surrogate due to its improved protein stability and high sequence similarity to the human counterpart. A crystal structure of the complex refined at 1.3 Å resolution revealed a unique binding mode, providing new avenues for targeting TRIM21 and for the development of proteolysis-targeting chimeras (PROTACs).

Authors

Institutions

Publication Details

Journal
Acta Crystallographica Section F Structural Biology Communications
Published
2025-02-13
DOI
https://doi.org/10.1107/s2053230x25000913
Citations
2
Primary Topic
Protein Degradation and Inhibitors
Type
article
Field-Weighted Citation Impact
1.61

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

LOPAC library screening identifies suramin as a TRIM21 binder with a unique binding mode revealed by crystal structure

Stefan Knapp, Yeojin Kim, Andreas Krämer
2 citations
Acta Crystallographica Section F Structural Biology Communications
Protein Degradation and Inhibitors
1.61
article

LOPAC library screening identifies suramin as a TRIM21 binder with a unique binding mode revealed by crystal structure

Stefan Knapp, Yeojin Kim, Andreas Krämer
article en
2 citations

Abstract

Differential scanning fluorimetry screening of the Library of Pharmacologically Active Compounds (LOPAC) identified four hits for the PRYSPRY domain of the human E3 ligase tripartite motif-containing protein 21 (TRIM21). Isothermal titration calorimetry subsequently confirmed suramin as a binder with micromolar affinity. To further investigate the binding mechanism, mouse TRIM21 was used as a structural surrogate due to its improved protein stability and high sequence similarity to the human counterpart. A crystal structure of the complex refined at 1.3 Å resolution revealed a unique binding mode, providing new avenues for targeting TRIM21 and for the development of proteolysis-targeting chimeras (PROTACs).

Acta Crystallographica Section F Structural Biology CommunicationsVol. 81(3)
Goethe University Frankfurt (DE)
Diamond Light Source, Innovative Medicines Initiative
Openalex Percentile: Top 19%
Protein Degradation and Inhibitors
1.61
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.