A chromosomal-scale reference genome for Rosa hugonis

Rosa hugonis is widely distributed in the Hengduan Mountains, Qinling Mountains, and northern China. It is an important candidate species for ecological restoration, given its good adaptability. Here, we present the first high-quality chromosome-level assembly of R. hugonis based on HiFi reads and Hi-C data. The sequencing data were then assembled onto seven pseudochromosomes of R. hugonis. The genome sizes of R. hugonis is 337.92 Mb, with contig N50 length of 26.84 Mb. We annotated 36,218 protein-coding genes in R. hugonis. In summary, the high-quality genome sequences of R. hugonis provide a genetic roadmap for the study of its genetics and species relationships. This will facilitate future genomic comparative studies across more species within Rosa.

Authors

Institutions

Publication Details

Journal
Scientific Data
Published
2025-02-15
DOI
https://doi.org/10.1038/s41597-025-04526-7
Citations
2
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
1.61
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

A chromosomal-scale reference genome for Rosa hugonis

Heng-Ning Deng, Shiqi Li, Jian Ru, Zhongyu Tang et al.
2 citations
Scientific Data
Genomics and Phylogenetic Studies
1.61
article

A chromosomal-scale reference genome for Rosa hugonis

Heng-Ning Deng, Shiqi Li, Jian Ru, Zhongyu Tang, Zhenlong Liang, Liang-Ying Li, Miao Jia, Xin‐Fen Gao, Ruifang Jiao
article en
2 citations

Abstract

Rosa hugonis is widely distributed in the Hengduan Mountains, Qinling Mountains, and northern China. It is an important candidate species for ecological restoration, given its good adaptability. Here, we present the first high-quality chromosome-level assembly of R. hugonis based on HiFi reads and Hi-C data. The sequencing data were then assembled onto seven pseudochromosomes of R. hugonis. The genome sizes of R. hugonis is 337.92 Mb, with contig N50 length of 26.84 Mb. We annotated 36,218 protein-coding genes in R. hugonis. In summary, the high-quality genome sequences of R. hugonis provide a genetic roadmap for the study of its genetics and species relationships. This will facilitate future genomic comparative studies across more species within Rosa.

Scientific DataVol. 12(1)
Shangrao Normal University (CN), Southwest University (CN), Chinese Academy of Sciences (CN), South China Botanical Garden (CN), Chengdu Institute of Biology (CN), University of Chinese Academy of Sciences (CN)
Openalex Percentile: Top 19%
Genomics and Phylogenetic Studies
1.61
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

A chromosomal-scale reference genome for Rosa hugonis — Heng-Ning Deng, Shiqi Li, et al. · Scientific Data (2025) | TGRS Research Map | TGRS