SpaFlow: a Nextflow pipeline for QC and clustering of MxIF datasets

Authors

Charlotte Hammerbeck-Ward (ORCID: https://orcid.org/0000-0002-0178-4199)
Raymond M. Moore (ORCID: https://orcid.org/0000-0003-4196-1804)
Jun Jiang (ORCID: https://orcid.org/0000-0003-1147-3666)
Brenna C. Novotny (ORCID: https://orcid.org/0000-0003-4732-1736)
Ellen L. Goode (ORCID: https://orcid.org/0000-0002-9094-8326)
Lynn Langit
Rachel L.G. Maus
Svetomir N. Markovic (ORCID: https://orcid.org/0000-0002-9238-4325)
Chen Wang (ORCID: https://orcid.org/0000-0002-3119-4763)
Ray Guo
David Haley

Institutions

University of Minnesota (US)
Mayo Clinic (US)
Jacksonville College (US)
WinnMed (US)
Mayo Clinic in Arizona (US)
Mayo Clinic in Florida (US)

Publication Details

Journal: Bioinformatics Advances
Published: 2024-12-26
DOI: https://doi.org/10.1093/bioadv/vbaf032
Primary Topic: Cell Image Analysis Techniques
Type: article
Field-Weighted Citation Impact: 0.00

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article

SpaFlow: a Nextflow pipeline for QC and clustering of MxIF datasets

Charlotte Hammerbeck-Ward, Raymond M. Moore, Jun Jiang, Brenna C. Novotny et al.

Dec 26, 2024

Bioinformatics Advances

Cell Image Analysis Techniques

article

SpaFlow: a Nextflow pipeline for QC and clustering of MxIF datasets

Charlotte Hammerbeck-Ward, Raymond M. Moore, Jun Jiang, Brenna C. Novotny, Ellen L. Goode, Lynn Langit, Rachel L.G. Maus, Svetomir N. Markovic, Chen Wang, Ray Guo, David Haley

December 26, 2024article en

Abstract

No abstract available for this paper.

Bioinformatics AdvancesVol. 5(1)

University of Minnesota (US), Mayo Clinic (US), Jacksonville College (US), WinnMed (US), Mayo Clinic in Arizona (US), Mayo Clinic in Florida (US)

Openalex Percentile: Top 84%

Cell Image Analysis Techniques

DOI Open Access PDF OpenAlex

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SpaFlow: a Nextflow pipeline for QC and clustering of MxIF datasets — Charlotte Hammerbeck-Ward, Raymond M. Moore, et al. · Bioinformatics Advances (2024) | TGRS Research Map | TGRS