PANoptosis-related genes in the prognosis and immune landscape of hepatocellular carcinoma

In hepatocellular carcinoma (HCC) individuals, the influence of numerous variables on the HCC prognosis has gained widespread recognition. Nevertheless, there remains a need for further elucidation regarding the underlying mechanism of PANoptosis-related genes (PRGs) on HCC. A consensus clustering approach, based on the TCGA-LIHC data, was used to identify specific subtypes linked to PANoptosis in this study. Next, a signature consisting of predictive differentially expressed genes for these subtypes was established using a least absolute shrinkage and selection operator (LASSO) regression analysis. Additionally, the reliability of the signature was confirmed through verification investigations using the data from the ICGC database and TCGA-LIHC. In the end, we developed a nomogram to enhance the clinical effectiveness of our prediction tool. PRG signature in this study has been highly related to the prognosis of individuals diagnosed with HCC, which was established with six genes. Also, this signature and clinicopathological features were put together to create a nomogram. Interestingly, the forecasting efficiency of this combination approach is better than other prediction models in the reported literature. In addition, an examination of the immunological surroundings indicates that the group with low risk exhibited elevated ESTIMATE score, ImmuneScores, and StromalScores. More, significant differences in infiltrating immune cells and the expression levels of immune-related genes were found between the two groups. In HCC patients, the PRG signature exhibits potential as a biomarker, offering a significant point of reference for tailoring individual therapy.

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Journal
Immunologic Research
Published
2025-02-13
DOI
https://doi.org/10.1007/s12026-025-09603-y
Citations
3
Primary Topic
Ferroptosis and cancer prognosis
Type
article
Field-Weighted Citation Impact
4.56
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article

PANoptosis-related genes in the prognosis and immune landscape of hepatocellular carcinoma

Xuejia Yang, Yuxiang Xue, Xingcheng Lin, Xiaowu Wang et al.
3 citations
Immunologic Research
Ferroptosis and cancer prognosis
4.56
article

PANoptosis-related genes in the prognosis and immune landscape of hepatocellular carcinoma

Xuejia Yang, Yuxiang Xue, Xingcheng Lin, Xiaowu Wang, Liangchen Qu, Ziwei Yuan, Yangyang Guo, Zhixuan Wu, Zhikai Wen
article en
3 citations

Abstract

In hepatocellular carcinoma (HCC) individuals, the influence of numerous variables on the HCC prognosis has gained widespread recognition. Nevertheless, there remains a need for further elucidation regarding the underlying mechanism of PANoptosis-related genes (PRGs) on HCC. A consensus clustering approach, based on the TCGA-LIHC data, was used to identify specific subtypes linked to PANoptosis in this study. Next, a signature consisting of predictive differentially expressed genes for these subtypes was established using a least absolute shrinkage and selection operator (LASSO) regression analysis. Additionally, the reliability of the signature was confirmed through verification investigations using the data from the ICGC database and TCGA-LIHC. In the end, we developed a nomogram to enhance the clinical effectiveness of our prediction tool. PRG signature in this study has been highly related to the prognosis of individuals diagnosed with HCC, which was established with six genes. Also, this signature and clinicopathological features were put together to create a nomogram. Interestingly, the forecasting efficiency of this combination approach is better than other prediction models in the reported literature. In addition, an examination of the immunological surroundings indicates that the group with low risk exhibited elevated ESTIMATE score, ImmuneScores, and StromalScores. More, significant differences in infiltrating immune cells and the expression levels of immune-related genes were found between the two groups. In HCC patients, the PRG signature exhibits potential as a biomarker, offering a significant point of reference for tailoring individual therapy.

Immunologic ResearchVol. 73(1)
Wenzhou Medical University (CN), Ruian People's Hospital (CN)
Good health and well-being
Openalex Percentile: Top 7%
Ferroptosis and cancer prognosis
4.56
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