A novel computational approach to dissect the cytoskeletal architecture of cancer cells with invasive potential

The identification of cancer cells with invasive and metastatic potential remains challenging. In recent years, it became evident that the organization of the cytoskeleton is dynamically orchestrated during cell transformation, but the impact of its remodelling is still largely unknown. In this study, we have developed a computational pipeline to characterize the cytoskeletal architecture of cancer cells and investigate fine-tuned cytoskeletal alterations. Our results have shown that the proposed computational framework was able to dissect unique cytoskeletal cues associated with invasive capacity. These include quantity, orientation, compactness, radiality, and morphology of microtubules. Validating our approach, we verified that microtubules of cells with disrupted E-cadherin and increased invasive rates are shorter, have disperse orientations and are more compactly distributed. Ultimately, this work provides a comprehensive portrait of the cytoskeleton reorganization that could be used as a proxy for automated analysis of cellular behaviour.

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Publication Details

Journal
Scientific Reports
Published
2025-02-13
DOI
https://doi.org/10.1038/s41598-024-82538-w
Primary Topic
Cellular Mechanics and Interactions
Type
article
Field-Weighted Citation Impact
0.00

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article

A novel computational approach to dissect the cytoskeletal architecture of cancer cells with invasive potential

Soraia Melo, José Carlos Machado, Maria Sofia Fernandes, Diogo Fróis Vieira et al.
Scientific Reports
Cellular Mechanics and Interactions
article

A novel computational approach to dissect the cytoskeletal architecture of cancer cells with invasive potential

Soraia Melo, José Carlos Machado, Maria Sofia Fernandes, Diogo Fróis Vieira, Ana Moreira, Raquel Seruca, Joana Figueiredo, João Sanches
article en

Abstract

The identification of cancer cells with invasive and metastatic potential remains challenging. In recent years, it became evident that the organization of the cytoskeleton is dynamically orchestrated during cell transformation, but the impact of its remodelling is still largely unknown. In this study, we have developed a computational pipeline to characterize the cytoskeletal architecture of cancer cells and investigate fine-tuned cytoskeletal alterations. Our results have shown that the proposed computational framework was able to dissect unique cytoskeletal cues associated with invasive capacity. These include quantity, orientation, compactness, radiality, and morphology of microtubules. Validating our approach, we verified that microtubules of cells with disrupted E-cadherin and increased invasive rates are shorter, have disperse orientations and are more compactly distributed. Ultimately, this work provides a comprehensive portrait of the cytoskeleton reorganization that could be used as a proxy for automated analysis of cellular behaviour.

Scientific ReportsVol. 15(1)
Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento (PT), Universidade do Porto (PT), i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto (PT)
Fundação para a Ciência e a Tecnologia, European Regional Development Fund
Openalex Percentile: Top 97%
Cellular Mechanics and Interactions
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A novel computational approach to dissect the cytoskeletal architecture of cancer cells with invasive potential — Soraia Melo, José Carlos Machado, et al. · Scientific Reports (2025) | TGRS Research Map | TGRS