Parallelization of a Method to Infer Genetic Networks in Multi-CPU Systems
Genetic regulatory networks represent the interactions present between genes and are a crucial step in understanding cellular physiology and complex pathological phenotypes. There are various methods to infer these networks from a set of genetic data. Among them, the MRNET method stands out, which is based on the mRMR feature selection algorithm. However, constructing genetic regulatory networks with MRNET is a computationally expensive process for large-scale datasets due to its cubic complexity concerning the number of genes. The objective of this work is to develop parallel versions of MRNET that can be executed on shared-memory parallel systems to accelerate its execution.
Authors
- Javier Gómez Darriba (ORCID: https://orcid.org/0000-0001-6712-2983)
- Jorge Méndez González (ORCID: https://orcid.org/0000-0001-8123-819X)
Publication Details
- Published
- 2024-11-01
- DOI
- https://doi.org/10.17979/spudc.9788497498913.5
- Primary Topic
- Evolutionary Algorithms and Applications
- Type
- article
- Field-Weighted Citation Impact
- 0.00