Chemical Synthesis of Activity‐Based Ubiquitin Probes for Profiling <i>Arabidopsis thaliana</i> Deubiquitinases

Abstract Abnormalities in deubiquitinating enzymes (DUBs) activity can lead to growth defects and reduced ability to respond to environmental stress in Arabidopsis thaliana ( A. thaliana ). However, there is currently a lack of adequate tools to profile active DUBs in plants such as A. thaliana . Here, we developed Ub ABPs that could be efficiently prepared to label A. thaliana DUBs. A total of 7 DUBs in plant lysates were labelled and identified in combination with label‐free quantification (LFQ) mass spectrometry. This work demonstrated the universality of ABP tools in plants and mammals.

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Publication Details

Journal
ChemistrySelect
Published
2025-02-01
DOI
https://doi.org/10.1002/slct.202404927
Primary Topic
Ubiquitin and proteasome pathways
Type
article
Field-Weighted Citation Impact
0.00

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article

Chemical Synthesis of Activity‐Based Ubiquitin Probes for Profiling Arabidopsis thaliana Deubiquitinases

Jing Shi, Pincheng Li, Hua Xiao, Yi‐Ming Li et al.
ChemistrySelect
Ubiquitin and proteasome pathways
article

Chemical Synthesis of Activity‐Based Ubiquitin Probes for Profiling Arabidopsis thaliana Deubiquitinases

Jing Shi, Pincheng Li, Hua Xiao, Yi‐Ming Li, Yanyan Guo, Xiaona Han
article en

Abstract

Abstract Abnormalities in deubiquitinating enzymes (DUBs) activity can lead to growth defects and reduced ability to respond to environmental stress in Arabidopsis thaliana ( A. thaliana ). However, there is currently a lack of adequate tools to profile active DUBs in plants such as A. thaliana . Here, we developed Ub ABPs that could be efficiently prepared to label A. thaliana DUBs. A total of 7 DUBs in plant lysates were labelled and identified in combination with label‐free quantification (LFQ) mass spectrometry. This work demonstrated the universality of ABP tools in plants and mammals.

ChemistrySelectVol. 10(6)
University of Science and Technology of China (CN), Hefei University of Technology (CN)
National Natural Science Foundation of China
Openalex Percentile: Top 98%
Ubiquitin and proteasome pathways
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