Deep sea spy: An online citizen science annotation platform for science and ocean literacy

The recent development of deep-sea observatories has enabled the acquisition of high temporal resolution imagery for studying the dynamics of deep-sea communities on hourly to multi-decadal scales. These unprecedented datasets offer valuable insight into the variation of species abundance and biology in relation to changes in environmental conditions. Since 2010, camera systems deployed at hydrothermal vents have acquired over 11 terabytes (TB) of data that cannot be processed by research labs only. Although deep learning offers an alternative to human processing, training algorithms requires large annotated reference datasets. The Deep Sea Spy project allows citizens to contribute to the annotation of pictures acquired with underwater platforms. Based on approximately 4000 photos, each annotated 10 times by independent participants, we were able to develop a data validation workflow that can be applied to similar databases. We compared these annotations with expert-annotated data and analysed the agreement rate among participants for each of the 15,000 annotated individual organisms to optimise the robustness and confidence level in non-expert citizen science. The optimal number of repeat annotations per photo was also analysed to guide the definition of a trade-off between the accuracy and amount of data. An agreement rate of 0.4 (i.e., 4 out of 10 participants detecting one given individual) was established as an efficient threshold to reach counts similar to that obtained from an expert. One important result lies in the robustness of the temporal trends of species abundance as revealed by time-series analyses. Regarding the number of times a photo needs to be annotated, results varied greatly depending on the target species and the difficulty of the associated task. Finally, we present the communication tools and actions deployed during the project and how the platform can serve educational and decision-making purposes. Deep Sea Spy and the proposed workflow have a strong potential to enhance marine environmental observation and monitoring. • Deep Sea Spy enables the processing of large archive of deep-sea images. • We propose a workflow to process and validate multi-participants annotation data based on pixel analysis. • Citizen data provide reliable data and robust long-term trends at low multi-participants agreement rates. • The proposed workflow enhances environmental observation and monitoring capacities. • Deep Sea Spy increases knowledge and contributes to citizen empowerment and engagement.

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Publication Details

Journal
Ecological Informatics
Published
2025-02-10
DOI
https://doi.org/10.1016/j.ecoinf.2025.103065
Citations
2
Primary Topic
Species Distribution and Climate Change
Type
article
Field-Weighted Citation Impact
3.68

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article

Deep sea spy: An online citizen science annotation platform for science and ocean literacy

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2 citations
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article

Deep sea spy: An online citizen science annotation platform for science and ocean literacy

Julie Tourolle, Riwan Leroux, Jozée Sarrazin, Marjolaine Matabos, Catherine Borremans, Pierre Cottais, Yannick Cenatiempo, Charlotte Gasne-Destaville, Nicolas Roullet
article en
2 citations

Abstract

The recent development of deep-sea observatories has enabled the acquisition of high temporal resolution imagery for studying the dynamics of deep-sea communities on hourly to multi-decadal scales. These unprecedented datasets offer valuable insight into the variation of species abundance and biology in relation to changes in environmental conditions. Since 2010, camera systems deployed at hydrothermal vents have acquired over 11 terabytes (TB) of data that cannot be processed by research labs only. Although deep learning offers an alternative to human processing, training algorithms requires large annotated reference datasets. The Deep Sea Spy project allows citizens to contribute to the annotation of pictures acquired with underwater platforms. Based on approximately 4000 photos, each annotated 10 times by independent participants, we were able to develop a data validation workflow that can be applied to similar databases. We compared these annotations with expert-annotated data and analysed the agreement rate among participants for each of the 15,000 annotated individual organisms to optimise the robustness and confidence level in non-expert citizen science. The optimal number of repeat annotations per photo was also analysed to guide the definition of a trade-off between the accuracy and amount of data. An agreement rate of 0.4 (i.e., 4 out of 10 participants detecting one given individual) was established as an efficient threshold to reach counts similar to that obtained from an expert. One important result lies in the robustness of the temporal trends of species abundance as revealed by time-series analyses. Regarding the number of times a photo needs to be annotated, results varied greatly depending on the target species and the difficulty of the associated task. Finally, we present the communication tools and actions deployed during the project and how the platform can serve educational and decision-making purposes. Deep Sea Spy and the proposed workflow have a strong potential to enhance marine environmental observation and monitoring. • Deep Sea Spy enables the processing of large archive of deep-sea images. • We propose a workflow to process and validate multi-participants annotation data based on pixel analysis. • Citizen data provide reliable data and robust long-term trends at low multi-participants agreement rates. • The proposed workflow enhances environmental observation and monitoring capacities. • Deep Sea Spy increases knowledge and contributes to citizen empowerment and engagement.

Ecological InformaticsVol. 86
Ifremer (FR), Université de Bretagne Occidentale (FR), Loudi Central Hospital (CN), Ball (France) (FR)
Institut Français de Recherche pour l'Exploitation de la Mer, European Commission, Agence Nationale de la Recherche
Quality Education
Openalex Percentile: Top 9%
Species Distribution and Climate Change
3.68
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