A157 PREDICTING SURVIVAL TIME FOR BOWEL RESECTION IN INDIVIDUAL CROHN DISEASE PATIENTS

Abstract Background Pediatric onset Crohn disease (pCD) tends to be more complicated with a higher likelihood of requiring intestinal resection surgery. Currently there are no predictive tools for surgery in pCD; risk scores and relative survival analysis are available, but these cannot accurately calculate the probability of surgery in children with CD at an individual level. Aims This study aims to apply machine learning to create an individual survival time distributions (ISD) tool for accurate prediction of bowel resection over time in a novel pCD patient. Methods A prospectively-followed cohort of pCD patients (n= 934) was collected through the Canadian Children Inflammatory Bowel Disease Network (CIDsCaNN) inception cohort (2013-2021). 58 of the 934 pCD patients underwent surgery, while the remaining 876 either did not require surgery by the study’s end, transitioned to adult care, or were lost to follow-up. Surgeries included bowel resections for stricturing or penetrating disease. Clinical, laboratory, and treatment data were compiled into three datasets: baseline, induction (baseline + 10 weeks follow-up data), and longitudinal (baseline + 3 equally spaced follow-up visits with all treatment data). To develop the ISD predictor, we built a learning algorithm that includes maximum relevance minimum redundancy (mRMR) feature selection, Cox Proportional Hazards, and Random Survival Forest models. To estimate the quality of the ISD predictor, measured by the Integrated Brier Score (IBS) and Concordance Index (C-Index), we used k-fold (external) cross validation. Results Our resulted ISD predictors, two trained Cox Proportional Hazards models and one Random Survival Forest model, had IBS scores < 0.1 and C-Index scores > 0.83. These results indicate that our models provide a reliable ranking of survival times based on the individual probability for surgery. The results also showed that the features that are most informative for prediction of surgery were stricturing behavior, penetrating behavior, and distal bowel involvement. Conclusions This study suggests that it is possible to produce an ISD predictor capable of forecasting bowel resection over future times in a novel pCD patient. This novel approach can build tools to improve both the choice and timing of therapy. Funding Agencies CIHRWomen and Children’s Health Research Institute

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Publication Details

Journal
Journal of the Canadian Association of Gastroenterology
Published
2025-02-01
DOI
https://doi.org/10.1093/jcag/gwae059.157
Primary Topic
Inflammatory Bowel Disease
Type
article
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article

A157 PREDICTING SURVIVAL TIME FOR BOWEL RESECTION IN INDIVIDUAL CROHN DISEASE PATIENTS

Wael El‐Matary, Mary Zachos, R G Suarez Suarez, A Otley et al.
2 links
Journal of the Canadian Association of Gastroenterology
Inflammatory Bowel Disease
article

A157 PREDICTING SURVIVAL TIME FOR BOWEL RESECTION IN INDIVIDUAL CROHN DISEASE PATIENTS

Wael El‐Matary, Mary Zachos, R G Suarez Suarez, A Otley, Abdul Sattar Shaikh, Kevan Jacobson, Colette Deslandres, Anne M. Griffiths, Tom Walters, Jennifer deBruyn, Eytan Wine, S. Nizam Ahmed, Hien Q. Huynh
article en

Abstract

Abstract Background Pediatric onset Crohn disease (pCD) tends to be more complicated with a higher likelihood of requiring intestinal resection surgery. Currently there are no predictive tools for surgery in pCD; risk scores and relative survival analysis are available, but these cannot accurately calculate the probability of surgery in children with CD at an individual level. Aims This study aims to apply machine learning to create an individual survival time distributions (ISD) tool for accurate prediction of bowel resection over time in a novel pCD patient. Methods A prospectively-followed cohort of pCD patients (n= 934) was collected through the Canadian Children Inflammatory Bowel Disease Network (CIDsCaNN) inception cohort (2013-2021). 58 of the 934 pCD patients underwent surgery, while the remaining 876 either did not require surgery by the study’s end, transitioned to adult care, or were lost to follow-up. Surgeries included bowel resections for stricturing or penetrating disease. Clinical, laboratory, and treatment data were compiled into three datasets: baseline, induction (baseline + 10 weeks follow-up data), and longitudinal (baseline + 3 equally spaced follow-up visits with all treatment data). To develop the ISD predictor, we built a learning algorithm that includes maximum relevance minimum redundancy (mRMR) feature selection, Cox Proportional Hazards, and Random Survival Forest models. To estimate the quality of the ISD predictor, measured by the Integrated Brier Score (IBS) and Concordance Index (C-Index), we used k-fold (external) cross validation. Results Our resulted ISD predictors, two trained Cox Proportional Hazards models and one Random Survival Forest model, had IBS scores < 0.1 and C-Index scores > 0.83. These results indicate that our models provide a reliable ranking of survival times based on the individual probability for surgery. The results also showed that the features that are most informative for prediction of surgery were stricturing behavior, penetrating behavior, and distal bowel involvement. Conclusions This study suggests that it is possible to produce an ISD predictor capable of forecasting bowel resection over future times in a novel pCD patient. This novel approach can build tools to improve both the choice and timing of therapy. Funding Agencies CIHRWomen and Children’s Health Research Institute

Journal of the Canadian Association of GastroenterologyVol. 8(Supplement_1)
Dalhousie University (CA), University of Alberta (CA), University of Calgary (CA), Hospital for Sick Children (CA), BC Children's Hospital (CA), University of Manitoba (CA), Université de Montréal (CA), McMaster University (CA)
Openalex Percentile: Top 97%
Inflammatory Bowel Disease
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