The China National GeneBank Sequence Archive (CNSA) 2024 update

The China National GeneBank Sequence Archive (CNSA) is an open and freely accessible curated data repository built for archiving, sharing, and reutilizing of multiomics data. The remarkable advancement in sequencing technologies has triggered a paradigm shift in life science research. However, it also poses tremendous challenges for the research community in data management and reusability. With the dramatic advance of sequencing technologies like spatial transcriptome sequencing, it brings an unprecedented explosion in sequence data and new requirements for data archiving. CNSA was established in 2017 as one of the fundamental infrastructures to offer multiomics data archiving for the worldwide research community. Here, we present the state-of-the-art enhancements of CNSA encompassing the dramatical increase of varied types of data, the latest features and services implemented in CNSA as well as consistent efforts supporting global cooperation in biodiversity preservation and utilization. CNSA provides public archiving and open-sharing services for sequencing data and relevant metadata including genome, transcriptome, metabolism, and proteome from single-cell (also spatial resolved) level to individual and population level, as well as further analyzed results. As of 2024, CNSA has archived >16.3 petabytes of data and provided the data curation, preservation, and open-share service for >1581 publications from >560 institutions. It plays a pivotal role in supporting global scientific projects such as the 10 000 Plant Genomes Project. So far, CNSA has been recommended by various academic publishers such as Cell, Elsevier, and Oxford University Press. CNSA is accessible at https://db.cngb.org/cnsa/.

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Publication Details

Journal
Horticulture Research
Published
2025-02-04
DOI
https://doi.org/10.1093/hr/uhaf036
Citations
11
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
8.87

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article

The China National GeneBank Sequence Archive (CNSA) 2024 update

Fengzhen Chen, Jiawei Tong, Fan Yang, Lijin You et al.
11 citations
Horticulture Research
Genomics and Phylogenetic Studies
8.87
article

The China National GeneBank Sequence Archive (CNSA) 2024 update

Fengzhen Chen, Jiawei Tong, Fan Yang, Lijin You, Zhicheng Xu, Weiwen Wang, M. Zhang, Xiaofeng Wei, Qingjiang Hu, Jieyu Wang, Wenjun Zeng, Ziyi He, Cong Tan, Xizheng Ma, Li Xia, Kailong Ma, Tao Yang, Xiaoqiang Li, Zhiyong Li, Bo Wang, Liang Li, Lei Zhang, Xun Xu, Ling Li, Jia Cai, Wenzhen Yang, Wensi Du, Cong Hua
article en
11 citations

Abstract

The China National GeneBank Sequence Archive (CNSA) is an open and freely accessible curated data repository built for archiving, sharing, and reutilizing of multiomics data. The remarkable advancement in sequencing technologies has triggered a paradigm shift in life science research. However, it also poses tremendous challenges for the research community in data management and reusability. With the dramatic advance of sequencing technologies like spatial transcriptome sequencing, it brings an unprecedented explosion in sequence data and new requirements for data archiving. CNSA was established in 2017 as one of the fundamental infrastructures to offer multiomics data archiving for the worldwide research community. Here, we present the state-of-the-art enhancements of CNSA encompassing the dramatical increase of varied types of data, the latest features and services implemented in CNSA as well as consistent efforts supporting global cooperation in biodiversity preservation and utilization. CNSA provides public archiving and open-sharing services for sequencing data and relevant metadata including genome, transcriptome, metabolism, and proteome from single-cell (also spatial resolved) level to individual and population level, as well as further analyzed results. As of 2024, CNSA has archived >16.3 petabytes of data and provided the data curation, preservation, and open-share service for >1581 publications from >560 institutions. It plays a pivotal role in supporting global scientific projects such as the 10 000 Plant Genomes Project. So far, CNSA has been recommended by various academic publishers such as Cell, Elsevier, and Oxford University Press. CNSA is accessible at https://db.cngb.org/cnsa/.

Horticulture ResearchVol. 12(5)
BGI Group (China) (CN), Botswana Geoscience Institute (BW), China National GeneBank (CN)
National Science and Technology Major Project
Partnerships for the goals
Openalex Percentile: Top 2%
Genomics and Phylogenetic Studies
8.87
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