Genomic, transcriptomic and metabolomic analyses of Amorphophallus albus provides insights into the evolution and resistance to southern blight pathogen

Here, we assembled and annotated the complete genome of <i>A. albus</i>, providing a chromosome-level assembly with a total genome size of 5.94 Gb and a contig N50 of 5.61 Mb. The <i>A. albus</i> genome comprised 19,908 gene families, including 467 unique families.The slightly larger genome size of <i>A. albus</i> compared to <i>A. konjac</i> may have been affected by a recent whole-genome duplication event. Transcriptional and metabolic analyses revealed significant enrichment of differentially expressed genes (DEGs) and differentially accumulated metabolites (DAMs) involved in phenylpropanoid biosynthesis, plant hormone signal transduction, phenylalanine metabolism, and the biosynthesis of phenylalanine, tyrosine, and tryptophan. These findings not only advance the understanding of genetic and evolutionary characteristics of A. albus but also provide a foundation for future research on the resistance mechanisms of <i>konjac</i> against southern blight disease.

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Publication Details

Journal
Frontiers in Plant Science
Published
2025-02-07
DOI
https://doi.org/10.3389/fpls.2024.1518058
Citations
3
Primary Topic
Plant pathogens and resistance mechanisms
Type
article
Field-Weighted Citation Impact
5.25
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article

Genomic, transcriptomic and metabolomic analyses of Amorphophallus albus provides insights into the evolution and resistance to southern blight pathogen

Baofu Qin, Chuan Shen, Jianfeng Qin, Gaoxin Zhou et al.
3 citations
Frontiers in Plant Science
Plant pathogens and resistance mechanisms
5.25
article

Genomic, transcriptomic and metabolomic analyses of Amorphophallus albus provides insights into the evolution and resistance to southern blight pathogen

Baofu Qin, Chuan Shen, Jianfeng Qin, Gaoxin Zhou, Longfei Duan
article en
3 citations

Abstract

Here, we assembled and annotated the complete genome of <i>A. albus</i>, providing a chromosome-level assembly with a total genome size of 5.94 Gb and a contig N50 of 5.61 Mb. The <i>A. albus</i> genome comprised 19,908 gene families, including 467 unique families.The slightly larger genome size of <i>A. albus</i> compared to <i>A. konjac</i> may have been affected by a recent whole-genome duplication event. Transcriptional and metabolic analyses revealed significant enrichment of differentially expressed genes (DEGs) and differentially accumulated metabolites (DAMs) involved in phenylpropanoid biosynthesis, plant hormone signal transduction, phenylalanine metabolism, and the biosynthesis of phenylalanine, tyrosine, and tryptophan. These findings not only advance the understanding of genetic and evolutionary characteristics of A. albus but also provide a foundation for future research on the resistance mechanisms of <i>konjac</i> against southern blight disease.

Frontiers in Plant ScienceVol. 15
Ankang University (CN), Northwest A&F University (CN)
Life in Land
Openalex Percentile: Top 6%
Plant pathogens and resistance mechanisms
5.25
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