Tamlana flava sp. nov., isolated from mangrove sediment and genome-based taxonomic analysis of the genus Tamlana
A novel yellow-coloured bacterial strain MA10<sup>T</sup> was isolated from mangrove sediment and subjected to polyphasic taxonomic identification. Strain MA10<sup>T</sup> was Gram-negative, rod-shaped, catalase-positive and oxidase-positive. Carotenoid pigment was present, and flexirubin-type pigment was absent. The 16S rRNA gene of strain MA10<sup>T</sup> had the highest sequence similarity with <i>Tamlana crocina</i> HST1-43<sup>T</sup> of 94.5%. The genome size was 3.77 Mbp with a genomic G+C content of 36.3%. The phylogenetic analysis of the 16S rRNA gene sequence and whole-genome sequence showed that strain MA10<sup>T</sup> belonged to the genus <i>Tamlana</i> of the family <i>Flavobacteriaceae</i> and tightly clustered with <i>T. crocina</i> HST1-43<sup>T</sup>. The digital DNA-DNA hybridization value and average nucleotide identity value between strain MA10<sup>T</sup> and <i>T. crocina</i> HST1-43<sup>T</sup> were 20.4 and 76.7%, respectively. The major menaquinone was MK-6. The major fatty acids (>10 %) were iso-C<sub>15:0</sub> (41.6%) and iso-C<sub>15:1</sub> G (16.8%). The polar lipids consisted of phosphatidylethanolamine, two unidentified aminolipids and three unidentified lipids. Based on the present polyphasic taxonomic study, strain MA10<sup>T</sup> was considered to represent a novel species of the genus <i>Tamlana</i>, for which the name <i>Tamlana flava</i> sp. nov. was proposed. The type strain was MA10<sup>T</sup> (=MCCC 1K09289<sup>T</sup>=KCTC 102321<sup>T</sup>). Additionally, the phylogeny of the 16S rRNA gene and whole-genome sequences found that the hitherto described nine species of the genus <i>Tamlana</i> and <i>Algibacter onchidii</i> presented polyphyletic clades, which could be divided into five different genera. The average amino acid identity value of 80% was chosen as the boundary of the five genera. Thus, except for the genus <i>Tamlana</i>, four novel genera named <i>Allotamlana</i> gen. nov., <i>Cognatitamlana</i> gen. nov., <i>Neotamlana</i> gen. nov. and <i>Pseudotamlana</i> gen. nov. were proposed. This study provided valuable taxonomic analysis of the genus <i>Tamlana</i>.
Authors
- Qiliang Lai (ORCID: https://orcid.org/0000-0002-0214-2825)
- Congjie Dai
- Zhaobin Huang (ORCID: https://orcid.org/0000-0002-1552-0629)
Institutions
- Quanzhou Normal University (CN)
- Ministry of Natural Resources (CN)
- Fujian Institute of Oceanography (CN)
Publication Details
- Journal
- INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Published
- 2025-02-07
- DOI
- https://doi.org/10.1099/ijsem.0.006673
- Citations
- 1
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.81
Funders
- Quanzhou City Science and Technology Program