Comprehensive Analysis of Granzymes and Perforin Family Genes in Multiple Cancers
<b>Background/Objectives:</b> Cancer remains a significant global health concern, with immunotherapies emerging as promising treatments. This study explored the role of perforin-1 (<i>PRF1</i>) and granzymes A, B and K (<i>GZMA</i>, <i>GZMB</i> and <i>GZMK</i>) in cancer biology, focusing on their impact on tumor cell death and immune response modulation. <b>Methods:</b> Through a comprehensive genomic analysis across various cancer types, we explored the differential expression, mutation profiles and methylation patterns of these genes, providing insights into their potential as therapeutic targets. Furthermore, we investigated their association with immune cell infiltration and pathway activation within the tumor microenvironment in each tumor type. <b>Results:</b> Our findings revealed distinct expression patterns and prognostic implications for <i>PRF1</i>, <i>GZMA</i>, <i>GZMB</i> and <i>GZMK</i> across different cancers, highlighting their multifaceted roles in tumor immunity. We found increased immune infiltration across all tumor types and significant correlations between the genes of interest and cytotoxic T cells, as well as the most significant survival outcomes in breast cancer. We also show that granzymes and perforin-1 are significantly associated with indicators of immunosuppression and T cell dysfunction within patient cohorts. In skin melanoma, glioblastoma, kidney and bladder cancers, we found significant correlations between the genes of interest and patient survival after receiving immune-checkpoint inhibition therapy. Additionally, we identified potential associations between the mRNA expression levels of these genes and drug sensitivity. <b>Conclusions:</b> Overall, this study enhances our understanding of the molecular mechanisms underlying tumor immunity and provides valuable insights into the potential therapeutic implications of <i>PRF1</i>, <i>GZMA</i>, <i>GZMB</i> and <i>GZMK</i> in cancer treatment.
Authors
- Manvita Mareboina (ORCID: https://orcid.org/0000-0001-6785-6047)
- Katrina Bakhl
- Nelson S. Yee (ORCID: https://orcid.org/0000-0002-1457-9047)
- Ilias Georgakopoulos‐Soares (ORCID: https://orcid.org/0000-0003-3641-1488)
- Apostolos Zaravinos (ORCID: https://orcid.org/0000-0003-4625-5562)
- Stephanie Agioti
Institutions
- Pennsylvania State University (US)
- European University Cyprus (CY)
- Penn State Milton S. Hershey Medical Center (US)
Publication Details
- Journal
- Biomedicines
- Published
- 2025-02-07
- DOI
- https://doi.org/10.3390/biomedicines13020408
- Citations
- 4
- Primary Topic
- RNA modifications and cancer
- Type
- article
- Field-Weighted Citation Impact
- 3.22
Funders
- Penn State College of Medicine