Accurate, comprehensive database of group I introns and their homing endonucleases
The database, as well as the code to generate it and a GUI to facilitate its exploration, are available at https://github.com/LaraSellesVidal/Group1IntronDatabase. The source code for the GUI implementation is available at https://github.com/LaraSellesVidal/OnlineGroup1IntronDatabase. The database can also be accessed online at https://online-group-1-intron-database.onrender.com. Base-pairing probability matrixes are available separately at https://www.ebi.ac.uk/biostudies/studies/S-BSST1399.
Authors
- Yohei Yokobayashi (ORCID: https://orcid.org/0000-0002-2417-1934)
- Lara Sellés Vidal (ORCID: https://orcid.org/0000-0003-2537-6824)
- Tomoya Noma
Institutions
- Okinawa Institute of Science and Technology Graduate University (JP)
Publication Details
- Journal
- Bioinformatics Advances
- Published
- 2024-12-26
- DOI
- https://doi.org/10.1093/bioadv/vbaf020
- Citations
- 4
- Primary Topic
- RNA and protein synthesis mechanisms
- Type
- article
- Field-Weighted Citation Impact
- 0.94
Funders
- Okinawa Institute of Science and Technology Graduate University
- Japan Society for the Promotion of Science