Insights into the Role of the D‐Cluster in [NiFe]‐CODH from <i>Rhodospirillum Rubrum</i>
The [NiFe]-CODH from Rhodospirillum rubrum contains [4Fe4S] clusters that allow electron transfer from the buried active sites to the protein surface. Among them, the role of the D-cluster, located at the dimer interface is still not fully understood. In this study, the removal of the D-cluster by site-directed mutagenesis revealed remarkable features in the behavior of the enzyme. Quantitative analysis and spectroscopic studies unveiled the suppression of D-cluster in the mutants and the influence on other metal cofactors. Furthermore, the CO oxidation activity in solution measured in the presence of methylviologen is almost completely abolished in the mutants. Conversely, direct electrochemistry at a functionalized carbon nanotube electrode shows that the mutants are still catalytically active reaching reduced but significant current densities of 0.7 mA cm<sup>-2</sup>. Moreover, the electroenzymatic activity towards oxygen is not affected by the removal of the D cluster. EPR studies reveal a remarkable change in the magnetic coupling between FeS clusters upon removal of the D-cluster, highlighting the effect of the location of this D-cluster at the dimer interface. It is noteworthy that in addition to its role as electron relay, the D-cluster appears to play an important role in the biosynthesis of the active site.
Authors
- Bruno Guigliarelli (ORCID: https://orcid.org/0000-0003-3807-1421)
- Alan Le Goff (ORCID: https://orcid.org/0000-0002-6765-5859)
- Julien Pérard (ORCID: https://orcid.org/0000-0002-0097-8872)
- Umberto Contaldo (ORCID: https://orcid.org/0000-0002-1700-170X)
- Thomas Pichon
- Christine Cavazza (ORCID: https://orcid.org/0000-0002-3657-1302)
Institutions
- Centre National de la Recherche Scientifique (FR)
- Aix-Marseille Université (FR)
- Commissariat à l'Énergie Atomique et aux Énergies Alternatives (FR)
- CEA Grenoble (FR)
- Bioénergétique et Ingénierie des Protéines (FR)
- Institut de Recherche Interdisciplinaire de Grenoble (FR)
- Laboratoire de Biotechnologie de l'Environnement (FR)
- Université Grenoble Alpes (FR)
Publication Details
- Journal
- Chemistry - A European Journal
- Published
- 2025-02-06
- DOI
- https://doi.org/10.1002/chem.202403648
- Citations
- 2
- Primary Topic
- Radioactive element chemistry and processing
- Type
- article
- Field-Weighted Citation Impact
- 1.07
Funders
- Aix-Marseille Université
- LABoratoires d’EXcellence ARCANE
- Agence Nationale de la Recherche