Insights into the Role of the D‐Cluster in [NiFe]‐CODH from <i>Rhodospirillum Rubrum</i>

The [NiFe]-CODH from Rhodospirillum rubrum contains [4Fe4S] clusters that allow electron transfer from the buried active sites to the protein surface. Among them, the role of the D-cluster, located at the dimer interface is still not fully understood. In this study, the removal of the D-cluster by site-directed mutagenesis revealed remarkable features in the behavior of the enzyme. Quantitative analysis and spectroscopic studies unveiled the suppression of D-cluster in the mutants and the influence on other metal cofactors. Furthermore, the CO oxidation activity in solution measured in the presence of methylviologen is almost completely abolished in the mutants. Conversely, direct electrochemistry at a functionalized carbon nanotube electrode shows that the mutants are still catalytically active reaching reduced but significant current densities of 0.7 mA cm<sup>-2</sup>. Moreover, the electroenzymatic activity towards oxygen is not affected by the removal of the D cluster. EPR studies reveal a remarkable change in the magnetic coupling between FeS clusters upon removal of the D-cluster, highlighting the effect of the location of this D-cluster at the dimer interface. It is noteworthy that in addition to its role as electron relay, the D-cluster appears to play an important role in the biosynthesis of the active site.

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Publication Details

Journal
Chemistry - A European Journal
Published
2025-02-06
DOI
https://doi.org/10.1002/chem.202403648
Citations
2
Primary Topic
Radioactive element chemistry and processing
Type
article
Field-Weighted Citation Impact
1.07

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article

Insights into the Role of the D‐Cluster in [NiFe]‐CODH from Rhodospirillum Rubrum

Bruno Guigliarelli, Alan Le Goff, Julien Pérard, Umberto Contaldo et al.
2 citations
Chemistry - A European Journal
Radioactive element chemistry and processing
1.07
article

Insights into the Role of the D‐Cluster in [NiFe]‐CODH from Rhodospirillum Rubrum

Bruno Guigliarelli, Alan Le Goff, Julien Pérard, Umberto Contaldo, Thomas Pichon, Christine Cavazza
article en
2 citations

Abstract

The [NiFe]-CODH from Rhodospirillum rubrum contains [4Fe4S] clusters that allow electron transfer from the buried active sites to the protein surface. Among them, the role of the D-cluster, located at the dimer interface is still not fully understood. In this study, the removal of the D-cluster by site-directed mutagenesis revealed remarkable features in the behavior of the enzyme. Quantitative analysis and spectroscopic studies unveiled the suppression of D-cluster in the mutants and the influence on other metal cofactors. Furthermore, the CO oxidation activity in solution measured in the presence of methylviologen is almost completely abolished in the mutants. Conversely, direct electrochemistry at a functionalized carbon nanotube electrode shows that the mutants are still catalytically active reaching reduced but significant current densities of 0.7 mA cm<sup>-2</sup>. Moreover, the electroenzymatic activity towards oxygen is not affected by the removal of the D cluster. EPR studies reveal a remarkable change in the magnetic coupling between FeS clusters upon removal of the D-cluster, highlighting the effect of the location of this D-cluster at the dimer interface. It is noteworthy that in addition to its role as electron relay, the D-cluster appears to play an important role in the biosynthesis of the active site.

Chemistry - A European JournalVol. 31(17)
Centre National de la Recherche Scientifique (FR), Aix-Marseille Université (FR), Commissariat à l'Énergie Atomique et aux Énergies Alternatives (FR), CEA Grenoble (FR), Bioénergétique et Ingénierie des Protéines (FR), Institut de Recherche Interdisciplinaire de Grenoble (FR), Laboratoire de Biotechnologie de l'Environnement (FR), Université Grenoble Alpes (FR)
Aix-Marseille Université, LABoratoires d’EXcellence ARCANE, Agence Nationale de la Recherche
Clean water and sanitation
Openalex Percentile: Top 26%
Radioactive element chemistry and processing
1.07
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