Serum N-Glycomics with Nano-LC-QToF LC-MS/MS Reveals N-Glycan Biomarkers for Glioblastoma, Meningioma, and High-Grade Meningioma
Alteration of glycosylation in cancer cells leads to the expression of tumor-associated glycans, which can be used as biomarkers for diagnosis and prognostic prediction of diseases. In this study, we used nano-LC-QToF to identify serum N-glycan biomarkers for the detection of brain tumors. We observed an increase in sialylated N-glycans and a decrease in fucosylated N-glycans in the serum of patients with glioblastoma (GBM) and meningioma (MG) compared to healthy individuals. In GBM, a combination of increased serum sialylated N-glycan (6_4_0_2 compound) and decreased fucosylated N-glycan (4_4_1_0 compound) was identified as the most appropriate panel, with an area under the curve (AUC) of 0.8660, 78.95% sensitivity, 84.21% specificity, and 82.89% accuracy. For MG, a combination of decreased 6_6_2_0 and 5_5_2_0 compounds and increased 4_4_1_1 compound achieved an AUC of 0.9260, 82.35% sensitivity, 78.57% specificity, and 80.26% accuracy for diagnosis of MG. Additionally, an increase in 5_5_1_0 and 4_3_0_0 compounds combined with a decrease in 7_7_4_3 was associated with high-grade MG (WHO grades II-III). In conclusion, we identified serum N-glycan profiles associated with brain tumors, highlighting their potential as biomarkers for the diagnosis and prognosis of these diseases.
Authors
- Michael Russelle Alvarez (ORCID: https://orcid.org/0000-0001-6411-9906)
- Atit Silsirivanit (ORCID: https://orcid.org/0000-0002-5777-3843)
- Kritsakorn Jingjit
- Charupong Saengboonmee (ORCID: https://orcid.org/0000-0003-1476-1129)
- Kulthida Vaeteewoottacharn (ORCID: https://orcid.org/0000-0001-6557-9680)
- Nontaphon Piyawattanametha
- Pichayen Duangthongphon (ORCID: https://orcid.org/0000-0002-5514-8892)
- Panupong Mahalapbutr (ORCID: https://orcid.org/0000-0003-4389-334X)
- Wunchana Seubwai (ORCID: https://orcid.org/0000-0002-9265-5113)
- Amnat Kitkhuandee (ORCID: https://orcid.org/0000-0002-9124-7572)
- Chaiwat Aphivatanasiri (ORCID: https://orcid.org/0000-0001-9185-4121)
- Sakda Waraasawapati (ORCID: https://orcid.org/0000-0003-0132-0017)
- Orasa Panawan (ORCID: https://orcid.org/0009-0006-2491-4837)
- Sheryl Joyce B. Grijaldo-Alvarez (ORCID: https://orcid.org/0000-0001-7822-6462)
- Carlito B. Lebrilla (ORCID: https://orcid.org/0000-0001-7190-5323)
- Sukanya Luang
- Kanlayanee Sawanyawisuth (ORCID: https://orcid.org/0000-0003-2260-6372)
- Worachart Let-itthiporn
- Anuchit Pankongsap
- Riya Gogte
Institutions
- Khon Kaen University (TH)
- University of California, Davis (US)
Publication Details
- Journal
- Journal of Proteome Research
- Published
- 2025-02-05
- DOI
- https://doi.org/10.1021/acs.jproteome.4c01090
- Citations
- 5
- Primary Topic
- Glycosylation and Glycoproteins Research
- Type
- article
- Field-Weighted Citation Impact
- 4.03
Funders
- Khon Kaen University
- National Research Council of Thailand