Computing transition pathways for the study of rare events using deep reinforcement learning

The transition pathway plays a central role in understanding the transition mechanism of dynamical systems. Identifying the transition pathway is usually a challenging task for complex and high-dimensional systems, for example, in the study of conformational changes for bio-molecules. In this work, we propose a deep reinforcement learning method for computing the transition pathway. The method employs a geometric approximation of the pathway by polygonal chains in the configuration space. The path-finding task is formulated as a cost minimization problem, where a cost function is adapted from the Freidlin-Wentzell action functional so that it is able to deal with rough potential-energy landscapes. Then the problem is solved by introducing an actor-critic algorithm, which incorporates the potential force of the system in the exploration policy and combines physical properties of the system in the neural networks for molecular systems. The proposed method in conjunction with reinforcement learning provides a way for exploring the transition region and computing the globally optimal transition pathway for systems with rough energy landscapes. We highlight the abilities of the method on three benchmark problems, including an extended Mueller system and a Lennard-Jones system of seven particles. • We develop a deep RL method for computing the transition pathway. • We formulate a cost minimization problem suitable for rough energy landscapes. • The method employs a geometric approximation of paths in the configuration space. • The method with exploration is able to compute the global optimal transition pathway. • The method does not require any prior knowledge of collective variables.

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Publication Details

Journal
Journal of Computational Physics
Published
2025-02-04
DOI
https://doi.org/10.1016/j.jcp.2025.113812
Primary Topic
Reinforcement Learning in Robotics
Type
article
Field-Weighted Citation Impact
0.00

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article

Computing transition pathways for the study of rare events using deep reinforcement learning

Bo Lin, Weiqing Ren, Yangzheng Zhong
Journal of Computational Physics
Reinforcement Learning in Robotics
article

Computing transition pathways for the study of rare events using deep reinforcement learning

Bo Lin, Weiqing Ren, Yangzheng Zhong
article en

Abstract

The transition pathway plays a central role in understanding the transition mechanism of dynamical systems. Identifying the transition pathway is usually a challenging task for complex and high-dimensional systems, for example, in the study of conformational changes for bio-molecules. In this work, we propose a deep reinforcement learning method for computing the transition pathway. The method employs a geometric approximation of the pathway by polygonal chains in the configuration space. The path-finding task is formulated as a cost minimization problem, where a cost function is adapted from the Freidlin-Wentzell action functional so that it is able to deal with rough potential-energy landscapes. Then the problem is solved by introducing an actor-critic algorithm, which incorporates the potential force of the system in the exploration policy and combines physical properties of the system in the neural networks for molecular systems. The proposed method in conjunction with reinforcement learning provides a way for exploring the transition region and computing the globally optimal transition pathway for systems with rough energy landscapes. We highlight the abilities of the method on three benchmark problems, including an extended Mueller system and a Lennard-Jones system of seven particles. • We develop a deep RL method for computing the transition pathway. • We formulate a cost minimization problem suitable for rough energy landscapes. • The method employs a geometric approximation of paths in the configuration space. • The method with exploration is able to compute the global optimal transition pathway. • The method does not require any prior knowledge of collective variables.

Journal of Computational PhysicsVol. 527
National University of Singapore (SG)
Ministry of Education - Singapore, National Natural Science Foundation of China
Openalex Percentile: Top 99%
Reinforcement Learning in Robotics
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