Sequence-based GWAS in 180,000 German Holstein cattle reveals new candidate variants for milk production traits

Our findings proved the power of large samples and sequence-based GWAS in detecting new association signals. In order to fully exploit the power of GWAS, one should aim at very large samples combined with whole-genome sequence data. These can also come with both computational and time burdens, as presented in our study. Although milk production traits in cattle are comprehensively investigated, the genetic background of these traits is still not fully understood, with the potential for many new associations to be revealed, as shown. With constantly growing sample sizes, we expect more insights into the genetic architecture of milk production traits in the future.

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Publication Details

Journal
Genetics Selection Evolution
Published
2025-02-04
DOI
https://doi.org/10.1186/s12711-025-00951-9
Citations
12
Primary Topic
Genetic and phenotypic traits in livestock
Type
article
Field-Weighted Citation Impact
21.81

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article

Sequence-based GWAS in 180,000 German Holstein cattle reveals new candidate variants for milk production traits

Johannes Heise, J.E. Pryce, Ana-Marija Križanac, Zengting Liu et al.
12 citations
Genetics Selection Evolution
Genetic and phenotypic traits in livestock
21.81
article

Sequence-based GWAS in 180,000 German Holstein cattle reveals new candidate variants for milk production traits

Johannes Heise, J.E. Pryce, Ana-Marija Križanac, Zengting Liu, Jens Tetens, Jörn Bennewitz, Clemens Falker‐Gieske, Christian Reimer, Georg Thaller
article en
12 citations

Abstract

Our findings proved the power of large samples and sequence-based GWAS in detecting new association signals. In order to fully exploit the power of GWAS, one should aim at very large samples combined with whole-genome sequence data. These can also come with both computational and time burdens, as presented in our study. Although milk production traits in cattle are comprehensively investigated, the genetic background of these traits is still not fully understood, with the potential for many new associations to be revealed, as shown. With constantly growing sample sizes, we expect more insights into the genetic architecture of milk production traits in the future.

Genetics Selection EvolutionVol. 57(1)
University of Hohenheim (DE), Friedrich-Loeffler-Institut (DE), La Trobe University (AU), Christian-Albrechts-Universität zu Kiel (DE), Agriculture Victoria (AU), AgriBio (AU), University of Göttingen (DE)
La Trobe University, Teagasc, Deutsche Forschungsgemeinschaft, Georg-August-Universität Göttingen, Max-Planck-Gesellschaft, Agriculture Victoria
Responsible consumption and production
Openalex Percentile: Top 0%
Genetic and phenotypic traits in livestock
21.81
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