Bacterial Diversity of Marine Biofilm Communities in Terra Nova Bay (Antarctica) by Culture‐Dependent and ‐Independent Approaches

Applying both culture-independent and -dependent approaches, bacterial diversity of marine biofilm communities colonising polyvinyl chloride panels submerged in Terra Nova Bay (Ross Sea, Antarctica) was investigated. Panels were deployed in two sites subjected to a different degree of anthropogenic impact (Road Bay [RB] impacted site and Punta Stocchino [PTS] control site). Biofilm samples were collected after 3 or 12 months to evaluate both short- and long-term microbial colonisation. Taxonomic composition of the microbial community was studied by 16S rRNA gene amplicon sequencing. Proteobacteria was the predominant phylum, followed by Bacteroidetes, Actinobacteria, Verrucomicrobia and Firmicutes. Impacted RB biofilms were found to contain a relevant fraction of potentially pathogenic bacterial genera, accounting for 27.49% of the whole community. A total of 86 psychrotolerant bacterial strains were isolated from the biofilm samples using culture-dependent techniques designed to enrich in Actinobacteria. These strains were assigned to three different phyla: Actinobacteria (54.65%), Firmicutes (32.56%) and Proteobacteria (12.79%). 2.73% of genera identified by metabarcoding were recovered also through cultivation, while 11 additional genera were uniquely yielded by cultivation. Functional screening of the isolates revealed their hydrolytic and oxidative enzyme activity patterns, giving new insights into the metabolic and biotechnological potential of microbial biofilm communities in Terra Nova Bay seawater.

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Publication Details

Journal
Environmental Microbiology
Published
2025-02-01
DOI
https://doi.org/10.1111/1462-2920.70045
Citations
7
Primary Topic
Microbial Community Ecology and Physiology
Type
article
Field-Weighted Citation Impact
12.01

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article

Bacterial Diversity of Marine Biofilm Communities in Terra Nova Bay (Antarctica) by Culture‐Dependent and ‐Independent Approaches

Ester M. Eckert, Flavia Marinelli, Gabriella Caruso, Elisa Binda et al.
7 citations
Environmental Microbiology
Microbial Community Ecology and Physiology
12.01
article

Bacterial Diversity of Marine Biofilm Communities in Terra Nova Bay (Antarctica) by Culture‐Dependent and ‐Independent Approaches

Ester M. Eckert, Flavia Marinelli, Gabriella Caruso, Elisa Binda, Di Cesare Andrea, Azzaro Maurizio, Bisaccia Melissa, Dell' Acqua Ombretta
article en
7 citations

Abstract

Applying both culture-independent and -dependent approaches, bacterial diversity of marine biofilm communities colonising polyvinyl chloride panels submerged in Terra Nova Bay (Ross Sea, Antarctica) was investigated. Panels were deployed in two sites subjected to a different degree of anthropogenic impact (Road Bay [RB] impacted site and Punta Stocchino [PTS] control site). Biofilm samples were collected after 3 or 12 months to evaluate both short- and long-term microbial colonisation. Taxonomic composition of the microbial community was studied by 16S rRNA gene amplicon sequencing. Proteobacteria was the predominant phylum, followed by Bacteroidetes, Actinobacteria, Verrucomicrobia and Firmicutes. Impacted RB biofilms were found to contain a relevant fraction of potentially pathogenic bacterial genera, accounting for 27.49% of the whole community. A total of 86 psychrotolerant bacterial strains were isolated from the biofilm samples using culture-dependent techniques designed to enrich in Actinobacteria. These strains were assigned to three different phyla: Actinobacteria (54.65%), Firmicutes (32.56%) and Proteobacteria (12.79%). 2.73% of genera identified by metabarcoding were recovered also through cultivation, while 11 additional genera were uniquely yielded by cultivation. Functional screening of the isolates revealed their hydrolytic and oxidative enzyme activity patterns, giving new insights into the metabolic and biotechnological potential of microbial biofilm communities in Terra Nova Bay seawater.

Environmental MicrobiologyVol. 27(2)
University of Insubria (IT), Water Research Institute (IT), National Research Council (IT), University of Genoa (IT)
Consorzio Interuniversitario Biotecnologie, Ministero dell’Istruzione, dell’Università e della Ricerca, Università degli Studi dell'Insubria
Life below water
Openalex Percentile: Top 2%
Microbial Community Ecology and Physiology
12.01
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