MUSET: set of utilities for constructing abundance unitig matrices from sequencing data
MUSET is open source and publicly available under the AGPL-3.0 licence in GitHub at https://github.com/CamilaDuitama/muset. Source code is implemented in C++ and provided with kmat_tools, a collection of tools for processing k-mer matrices. Version v0.5.1 is available on Zenodo with DOI 10.5281/zenodo.14164801.
Authors
- Camila Duitama González (ORCID: https://orcid.org/0000-0001-6805-2331)
- Yoann Dufresne (ORCID: https://orcid.org/0000-0002-0930-8920)
- Riccardo Vicedomini (ORCID: https://orcid.org/0000-0002-7706-0998)
- Francesco Andreace (ORCID: https://orcid.org/0009-0008-0566-200X)
- Rayan Chikhi (ORCID: https://orcid.org/0000-0003-1099-8735)
Institutions
- Centre National de la Recherche Scientifique (FR)
- Institut Pasteur (FR)
- Université Sorbonne Nouvelle (FR)
- Université Paris Cité (FR)
- Sorbonne Université (FR)
- Université Paris 1 Panthéon-Sorbonne (FR)
- Université de Rennes (FR)
Publication Details
- Journal
- Bioinformatics
- Published
- 2025-02-03
- DOI
- https://doi.org/10.1093/bioinformatics/btaf054
- Citations
- 1
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Agence Nationale de la Recherche
- HORIZON EUROPE Framework Programme