Backbone and side‑chain 1H, 13C and 15N resonance assignments and secondary structure determination of the rhizobial FixJ
The symbiotic nitrogen-fixing bacterium Bradyrhizobium japonicum (B.japonicum) enables high soybean yields with little or no nitrogen fertiliser. A two component regulatory system comprising FixL, a histidine kinase with O<sub>2</sub>-sensing activity, and FixJ, a response regulator, controls the expression of genes involved in nitrogen fixation, such as fixK and nifA. Only under anaerobic conditions, the monophosphate group is transferred from FixL to the N-terminal receiver domain of FixJ (FixJ<sub>N</sub>), which eventually promote the association of the C-terminal effector domain (FixJ<sub>C</sub>) to the promoter regions of the nitrogen-fixation-related genes. Structural biological analyses carried out so far for rhizobial FixJ molecules have proposed a solution structure for FixJ that differs from the crystal structures, in which the two domains are extended. To understand the FixJ activation caused by phosphorylation of the N-terminal domain, which presumably regulates through the interactions between FixJ<sub>N</sub> and FixJ<sub>C</sub>, here we have performed backbone and sidechain resonance assignments of the unphosphorylated state of B. japonicum FixJ.
Authors
- Pooppadi Maxin Sayeesh
- Masaki Mishima (ORCID: https://orcid.org/0000-0001-7626-7287)
- Yutaka Ito (ORCID: https://orcid.org/0000-0002-1030-4660)
- Kohsuke Inomata (ORCID: https://orcid.org/0000-0002-6816-7961)
- Yoshitsugu Shiro (ORCID: https://orcid.org/0000-0003-0695-8327)
- Riki Watanabe
- Teppei Ikeya (ORCID: https://orcid.org/0000-0002-6721-3727)
- Ryoji Okubo
- Hitomi Sawai (ORCID: https://orcid.org/0000-0002-0714-8337)
- Kaori Kurashima-Ito
- Hiroyasu Koteishi (ORCID: https://orcid.org/0000-0001-5115-0963)
- Akio Horikawa
- Naoki Hishikura
Institutions
- Tokyo University of Pharmacy and Life Sciences (JP)
- University of Hyogo (JP)
- National Institutes of Natural Sciences (JP)
- Okazaki National Research Institutes (JP)
- RIKEN Center for Biosystems Dynamics Research (JP)
- Institute for Molecular Science (JP)
- Protein Research Foundation (JP)
- Nagasaki University (JP)
- Tokyo Metropolitan University (JP)
- The University of Osaka (JP)
Publication Details
- Journal
- Biomolecular NMR Assignments
- Published
- 2025-02-01
- DOI
- https://doi.org/10.1007/s12104-025-10221-w
- Primary Topic
- Legume Nitrogen Fixing Symbiosis
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Tokyo Metropolitan University