Extensive benchmarking of a method that estimates external model performance from limited statistical characteristics

Predictive model performance may deteriorate when applied to data sources that were not used for training, thus, external validation is a key step in successful model deployment. As access to patient-level external data sources is typically limited, we recently proposed a method that estimates external model performance using only external summary statistics. Here, we benchmark the proposed method on multiple tasks using five large heterogeneous US data sources, where each, in turn, plays the role of an internal source and the remaining-external. Results showed accurate estimations for all metrics: 95th error percentiles for the area under the receiver operating characteristics (discrimination), calibration-in-the-large (calibration), Brier and scaled Brier scores (overall accuracy) of 0.03, 0.08, 0.0002, and 0.07, respectively. These results demonstrate the feasibility of estimating the transportability of prediction models using an internal cohort and external statistics. It may become an important accelerator of model deployment.

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Publication Details

Journal
npj Digital Medicine
Published
2025-01-27
DOI
https://doi.org/10.1038/s41746-024-01414-z
Citations
5
Primary Topic
Energy Load and Power Forecasting
Type
article
Field-Weighted Citation Impact
3.65
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article

Extensive benchmarking of a method that estimates external model performance from limited statistical characteristics

Tal El‐Hay, Chen Yanover, Jenna Reps
5 citations
npj Digital Medicine
Energy Load and Power Forecasting
3.65
article

Extensive benchmarking of a method that estimates external model performance from limited statistical characteristics

Tal El‐Hay, Chen Yanover, Jenna Reps
article en
5 citations

Abstract

Predictive model performance may deteriorate when applied to data sources that were not used for training, thus, external validation is a key step in successful model deployment. As access to patient-level external data sources is typically limited, we recently proposed a method that estimates external model performance using only external summary statistics. Here, we benchmark the proposed method on multiple tasks using five large heterogeneous US data sources, where each, in turn, plays the role of an internal source and the remaining-external. Results showed accurate estimations for all metrics: 95th error percentiles for the area under the receiver operating characteristics (discrimination), calibration-in-the-large (calibration), Brier and scaled Brier scores (overall accuracy) of 0.03, 0.08, 0.0002, and 0.07, respectively. These results demonstrate the feasibility of estimating the transportability of prediction models using an internal cohort and external statistics. It may become an important accelerator of model deployment.

npj Digital MedicineVol. 8(1)
IMI TAMI Institute for Research and Development (IL), Kishwaukee College (US), Janssen (United States) (US)
Openalex Percentile: Top 8%
Energy Load and Power Forecasting
3.65
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