Biosynthetic Characterization of Bacillibactin in Thermophilic Bacillaceae and its Potential for <i>in Vitro</i> Mutational Synthesis

Bacillibactin (BB) is a microbial siderophore produced by Bacillus species. BB is biosynthesized from 2,3-dihydroxybenzoic acid (2,3-DHB), Gly, and L-Thr by nonribosomal peptide synthetase (NRPS) enzymes DhbE, DhbB, and DhbF. The biosynthetic gene cluster (dhb) is also conserved in some strains of thermophilic genera, Geobacillus, Anoxybacillus and Parageobacillus. However, the production of BB from these thermophilic bacteria has not been characterized. Here, we report in vivo and in vitro characterization of BB biosynthesis in Parageobacillus sp. KH3-4 which grows at 65 °C. We confirmed BB production in this thermophilic bacterium and the gene cluster active. In vitro enzymatic analysis revealed that 4'-phosphopantetheinyltransferase (PPTase) encoded in the same gene cluster is responsible for the post-translational maturation of carrier proteins. DhbE and DhbF showed substrate preference to 2,3-DHB and Gly and L-Thr, respectively, consistent with the chemical structure of BB. With the purified enzymes, we successfully reconstituted the NRPS assembly line in vitro. In addition, using chemically synthesized acyl-N-acetylcysteamine substrate analogues, BB analogues possessing methylbenzoyl groups instead of 2,3-DHB were detected. This study provides a new insight into secondary metabolism in thermophiles, and it expands the temperature limitation of NRPS enzymes.

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Publication Details

Journal
ChemBioChem
Published
2025-01-27
DOI
https://doi.org/10.1002/cbic.202400836
Citations
3
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
2.42

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article

Biosynthetic Characterization of Bacillibactin in Thermophilic Bacillaceae and its Potential for in Vitro Mutational Synthesis

Kentaro Miyazaki, Hiroya Tomita, Kohsuke Honda, Ryo Otsuka et al.
3 citations
ChemBioChem
Genomics and Phylogenetic Studies
2.42
article

Biosynthetic Characterization of Bacillibactin in Thermophilic Bacillaceae and its Potential for in Vitro Mutational Synthesis

Kentaro Miyazaki, Hiroya Tomita, Kohsuke Honda, Ryo Otsuka, M. Izumi
article en
3 citations

Abstract

Bacillibactin (BB) is a microbial siderophore produced by Bacillus species. BB is biosynthesized from 2,3-dihydroxybenzoic acid (2,3-DHB), Gly, and L-Thr by nonribosomal peptide synthetase (NRPS) enzymes DhbE, DhbB, and DhbF. The biosynthetic gene cluster (dhb) is also conserved in some strains of thermophilic genera, Geobacillus, Anoxybacillus and Parageobacillus. However, the production of BB from these thermophilic bacteria has not been characterized. Here, we report in vivo and in vitro characterization of BB biosynthesis in Parageobacillus sp. KH3-4 which grows at 65 °C. We confirmed BB production in this thermophilic bacterium and the gene cluster active. In vitro enzymatic analysis revealed that 4'-phosphopantetheinyltransferase (PPTase) encoded in the same gene cluster is responsible for the post-translational maturation of carrier proteins. DhbE and DhbF showed substrate preference to 2,3-DHB and Gly and L-Thr, respectively, consistent with the chemical structure of BB. With the purified enzymes, we successfully reconstituted the NRPS assembly line in vitro. In addition, using chemically synthesized acyl-N-acetylcysteamine substrate analogues, BB analogues possessing methylbenzoyl groups instead of 2,3-DHB were detected. This study provides a new insight into secondary metabolism in thermophiles, and it expands the temperature limitation of NRPS enzymes.

ChemBioChemVol. 26(5)
Museum of Japanese Art Yamato Bunkakan (JP), Osaka International University (JP), The University of Osaka (JP)
Ministry of Education, Culture, Sports, Science and Technology
Openalex Percentile: Top 13%
Genomics and Phylogenetic Studies
2.42
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Biosynthetic Characterization of Bacillibactin in Thermophilic Bacillaceae and its Potential for <i>in Vitro</i> Mutational Synthesis — Kentaro Miyazaki, Hiroya Tomita, et al. · ChemBioChem (2025) | TGRS Research Map | TGRS