Chemical pure reaction automata in maximally parallel manner
Abstract This work presents a new class of reaction automata, called Chemical Pure Reaction Automata (CPRA). CPRA combines characteristics of chemical reaction automata, as introduced by Okubo et al. in 2016, with those of the more recently defined pure reaction automata. Unlike standard chemical reaction automata, CPRA lack permanence, meaning their result states consist solely of the reaction products, with unconsumed reactants being discarded. We investigate the computational power of two CPRA variants, both working in a maximally parallel manner. We first prove that deterministic CPRA (DCPRA)—in which at every state, for each input symbol, the resulting state is the same for all multisets of enabled reactions—are not Turing complete. We then show that non-deterministic CPRA are Turing complete and thus strictly more powerful than DCPRA: namely, the set of languages accepted by CPRA in the maximally parallel manner contains the set of languages accepted by standard chemical reaction automata in the same manner.
Authors
- Luca Manzoni (ORCID: https://orcid.org/0000-0001-6312-7728)
- Giulia Bernardini (ORCID: https://orcid.org/0000-0003-0016-0728)
- Rocco Ascone (ORCID: https://orcid.org/0009-0006-1390-4967)
- Francesco Leiter
Institutions
- University of Trieste (IT)
Publication Details
- Journal
- Journal of Membrane Computing
- Published
- 2025-01-22
- DOI
- https://doi.org/10.1007/s41965-024-00176-7
- Citations
- 1
- Primary Topic
- DNA and Biological Computing
- Type
- article
- Field-Weighted Citation Impact
- 0.81
Funders
- Istituto Nazionale di Alta Matematica "Francesco Severi"
- Università degli Studi di Trieste
- Gruppo Nazionale per il Calcolo Scientifico