Complete genome sequence of Pseudomonas aeruginosa YK01, a sequence type 16 isolated from a patient with keratitis
A complete genome of 6.3 Mb was obtained for P. aeruginosa YK01 by combining Illumina 150-bp short reads and Nanopore long reads. The assembly is fully complete with chromosomal genome size of 6,183,266 bp, presenting a GC content of 66.7%, and a plasmid with the size of 46,067 bp, presenting GC content of 59.0%. Predicted chromosomal genomic features include 5,709 CDS, 12 rRNAs, 63 tRNAs, 4 ncRNAs, and 5,788 genes. To our knowledge, this genome data represents the first complete genome of P. aeruginosa ST16, providing crucial information for further comparative genome analysis.
Authors
- Shuo Jiang (ORCID: https://orcid.org/0009-0002-9505-138X)
- Huiluo Cao (ORCID: https://orcid.org/0009-0005-7312-2935)
- Xiaoshan Lin
- Mengmin Ye
- Ke Liu (ORCID: https://orcid.org/0009-0002-0594-4484)
Institutions
- Sun Yat-sen University (CN)
- Jinan University (CN)
- Third Affiliated Hospital of Southern Medical University (CN)
- The First Affiliated Hospital, Sun Yat-sen University (CN)
- HKU-Pasteur Research Pole (HK)
- Southern Medical University (CN)
- University of Hong Kong (HK)
Publication Details
- Journal
- BMC Genomic Data
- Published
- 2025-01-22
- DOI
- https://doi.org/10.1186/s12863-025-01298-2
- Citations
- 1
- Primary Topic
- Bacterial biofilms and quorum sensing
- Type
- article
- Field-Weighted Citation Impact
- 0.81
Funders
- Oxford Nanopore Technologies
- Health and Medical Research Fund