IR Fingerprint of the Intermolecular Hydrogen Bond on Amino Acids and Its Relevance to Chaperone Activity of αB-Crystallin

Intermolecular hydrogen bonds between carboxyl (COO<sup>-</sup>) and amino groups are a common weak interaction in proteins. Infrared (IR) spectral assignment of such an intermolecular hydrogen bond provides a fingerprint for studying protein-protein interactions as its absorption frequency is affected by the molecular electrostatic environment. Temperature-dependent FTIR and temperature-jump time-resolved IR absorbance difference spectra of several typical amino acids and those of wild type and single-site mutated αB-crystallin were performed. It was found that the antisymmetric vibrational frequency of the COO<sup>-</sup> groups in amino acids decreases from approximately 1626 to 1610 cm<sup>-1</sup> upon the formation of intermolecular hydrogen bonds, which was further supported by DFT calculations, while the IR frequency of the intermolecular hydrogen bonds on the formation of intermolecular hydrogen bonds, which was further supported by DFT calculations, while the IR frequency of the intermolecular hydrogen bonded COO<sup>-</sup> groups at the αB-crystallin dimeric interface was also observed around 1610 cm<sup>-1</sup>. With this spectral label, the active site of αB-crystallin, a heat shock molecular chaperone against the UV-light-damaged γD-crystallin was investigated. The active site was found to be localized at an arch loop structure connecting the two β-strands locked by intermolecular hydrogen bonds at the dimeric interface. It is the liberated arch loop after breaking of the intermolecular hydrogen bond locks that binds the damaged γD-crystallin, leading to the observed chaperone-like activity of αB-crystallin.

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Publication Details

Journal
The Journal of Physical Chemistry B
Published
2025-01-22
DOI
https://doi.org/10.1021/acs.jpcb.4c07865
Citations
4
Primary Topic
Connexins and lens biology
Type
article
Field-Weighted Citation Impact
3.22

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article

IR Fingerprint of the Intermolecular Hydrogen Bond on Amino Acids and Its Relevance to Chaperone Activity of αB-Crystallin

Meixia Ruan, Yuxiang Weng, Yingjie Wang, G. R. Liao et al.
4 citations
The Journal of Physical Chemistry B
Connexins and lens biology
3.22
article

IR Fingerprint of the Intermolecular Hydrogen Bond on Amino Acids and Its Relevance to Chaperone Activity of αB-Crystallin

Meixia Ruan, Yuxiang Weng, Yingjie Wang, G. R. Liao, Hailong Chen
article en
4 citations

Abstract

Intermolecular hydrogen bonds between carboxyl (COO<sup>-</sup>) and amino groups are a common weak interaction in proteins. Infrared (IR) spectral assignment of such an intermolecular hydrogen bond provides a fingerprint for studying protein-protein interactions as its absorption frequency is affected by the molecular electrostatic environment. Temperature-dependent FTIR and temperature-jump time-resolved IR absorbance difference spectra of several typical amino acids and those of wild type and single-site mutated αB-crystallin were performed. It was found that the antisymmetric vibrational frequency of the COO<sup>-</sup> groups in amino acids decreases from approximately 1626 to 1610 cm<sup>-1</sup> upon the formation of intermolecular hydrogen bonds, which was further supported by DFT calculations, while the IR frequency of the intermolecular hydrogen bonds on the formation of intermolecular hydrogen bonds, which was further supported by DFT calculations, while the IR frequency of the intermolecular hydrogen bonded COO<sup>-</sup> groups at the αB-crystallin dimeric interface was also observed around 1610 cm<sup>-1</sup>. With this spectral label, the active site of αB-crystallin, a heat shock molecular chaperone against the UV-light-damaged γD-crystallin was investigated. The active site was found to be localized at an arch loop structure connecting the two β-strands locked by intermolecular hydrogen bonds at the dimeric interface. It is the liberated arch loop after breaking of the intermolecular hydrogen bond locks that binds the damaged γD-crystallin, leading to the observed chaperone-like activity of αB-crystallin.

The Journal of Physical Chemistry BVol. 129(4)
Shenzhen Bay Laboratory (CN), Songshan Lake Materials Laboratory (CN), Institute of Physics (CN), University of Chinese Academy of Sciences (CN)
National Natural Science Foundation of China, Chinese Academy of Sciences
Openalex Percentile: Top 10%
Connexins and lens biology
3.22
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