MHN-GCN: A Cancer Driver Gene Prediction Method for Multi-Omics Data

Identifying cancer driver genes is crucial for studying targeted therapies. Due to the complexity of cancer, single-omics data often fall short in elucidating cancer genes. Therefore, this paper proposes a novel cancer gene prediction method, MHN-GCN, which integrates data from gene expression, DNA methylation, mutations, and copy number variations to predict cancer genes accurately. By comparing with currently popular single-omics data prediction methods and multi-omics data prediction methods, it was found that MHN-GCN performed well in most metrics. Subsequently, bioinformatics analysis was conducted on the predicted genes to explore these suspicious genes' functions and potential mechanisms, providing new research directions. The MHN-GCN proposed in this paper provides valuable insights for predicting cancer driver genes.

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Publication Details

Published
2024-10-06
DOI
https://doi.org/10.1109/smc54092.2024.10831427
Citations
1
Primary Topic
Gene expression and cancer classification
Type
article
Field-Weighted Citation Impact
0.23

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article

MHN-GCN: A Cancer Driver Gene Prediction Method for Multi-Omics Data

Xuedong Zheng, D.C. Wang, Xing Lv
1 citations
Gene expression and cancer classification
0.23
article

MHN-GCN: A Cancer Driver Gene Prediction Method for Multi-Omics Data

Xuedong Zheng, D.C. Wang, Xing Lv
article en
1 citations

Abstract

Identifying cancer driver genes is crucial for studying targeted therapies. Due to the complexity of cancer, single-omics data often fall short in elucidating cancer genes. Therefore, this paper proposes a novel cancer gene prediction method, MHN-GCN, which integrates data from gene expression, DNA methylation, mutations, and copy number variations to predict cancer genes accurately. By comparing with currently popular single-omics data prediction methods and multi-omics data prediction methods, it was found that MHN-GCN performed well in most metrics. Subsequently, bioinformatics analysis was conducted on the predicted genes to explore these suspicious genes' functions and potential mechanisms, providing new research directions. The MHN-GCN proposed in this paper provides valuable insights for predicting cancer driver genes.

Shenyang Aerospace University (CN)
National Natural Science Foundation of China, Natural Science Foundation of Liaoning Province, Scientific Research Fund of Liaoning Provincial Education Department, Higher Education Discipline Innovation Project
Openalex Percentile: Top 40%
Gene expression and cancer classification
0.23
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