Semantic grounding of LLMs using knowledge graphs for query reformulation in medical information retrieval

The widespread adoption of electronic health records has generated a vast amount of patient-related data, mostly presented in the form of unstructured text, which could be used for document retrieval. However, querying these texts in full could present challenges due to their unstructured and lengthy nature, as they may contain noise or irrelevant terms that can interfere with the retrieval process. Recently, large language models (LLMs) have revolutionized natural language processing tasks. However, despite their promising capabilities, their use in the medical domain has raised concerns due to their lack of understanding, hallucinations, and reliance on outdated knowledge. To address these concerns, we evaluate a Retrieval Augmented Generation (RAG) approach that integrates medical knowledge graphs with LLMs to support query refinement in medical document retrieval tasks. Our initial findings from experiments using two benchmark TREC datasets demonstrate that knowledge graphs can effectively ground LLMs in the medical domain.

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Published
2024-12-15
DOI
https://doi.org/10.1109/bigdata62323.2024.10826117
Citations
1
Primary Topic
Topic Modeling
Type
article
Field-Weighted Citation Impact
0.35

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article

Semantic grounding of LLMs using knowledge graphs for query reformulation in medical information retrieval

Antonela Tommasel, Ira Assent
1 citations
Topic Modeling
0.35
article

Semantic grounding of LLMs using knowledge graphs for query reformulation in medical information retrieval

Antonela Tommasel, Ira Assent
article en
1 citations

Abstract

The widespread adoption of electronic health records has generated a vast amount of patient-related data, mostly presented in the form of unstructured text, which could be used for document retrieval. However, querying these texts in full could present challenges due to their unstructured and lengthy nature, as they may contain noise or irrelevant terms that can interfere with the retrieval process. Recently, large language models (LLMs) have revolutionized natural language processing tasks. However, despite their promising capabilities, their use in the medical domain has raised concerns due to their lack of understanding, hallucinations, and reliance on outdated knowledge. To address these concerns, we evaluate a Retrieval Augmented Generation (RAG) approach that integrates medical knowledge graphs with LLMs to support query refinement in medical document retrieval tasks. Our initial findings from experiments using two benchmark TREC datasets demonstrate that knowledge graphs can effectively ground LLMs in the medical domain.

Consejo Nacional de Investigaciones Científicas y Técnicas (AR), Aarhus University (DK)
Innovation Fund
Quality Education
Openalex Percentile: Top 30%
Topic Modeling
0.35
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