[Fast identification of origins and cultivation patterns of Astragali Radix by dimension reduction algorithms of hyperspectral data].

This study aims to establish a rapid and non-destructive method for recognizing the origins and cultivation patterns of Astragali Radix. A hyperspectral imaging system(spectral ranges: 400-1 000 nm, 900-1 700 nm; detection time: 15 s) was used to examine the samples of Astragali Radix with different origins and cultivation patterns. The collected hyperspectral datasets were highly correlated and numerous, which required the establishment of stable and reliable dimension reduction and classification models. Firstly, the original spectra were preprocessed by normalization, Gaussian smoothing, and masking. Then, principal component analysis(PCA), partial least squares-discriminant analysis(PLS-DA), and competitive adaptive reweighted sampling(CARS) were performed to reduce the dimension of the hyperspectral data. Finally, support vector machine(SVM), feedforward neural network(FFNN), and convolutional neural network(CNN) were used for data training of the spectral images and spectral curves with dimension reduction. The results showed that applying CARS as a variable selection method before PLS-DA on the hyperspectral data of Astragali Radix achieved the accuracy, precision, and recall of 100% on the CNN test dataset. The F_1-score and area under the curve of ROC(AUC) reached 1. This method is convenient, quick, sample-saving, and non-destructive, providing technical support for rapid identification of the origins and cultivation patterns of Astragali Radix.

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Publication Details

Journal
PubMed
Published
2024-12-01
DOI
https://doi.org/10.19540/j.cnki.cjcmm.20240827.101
Primary Topic
Traditional Chinese Medicine Studies
Type
article
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[Fast identification of origins and cultivation patterns of Astragali Radix by dimension reduction algorithms of hyperspectral data].

Hong Jiang, Feixiang Zhou, Baolin Guo, Pan Cheng et al.
PubMed
Traditional Chinese Medicine Studies
article

[Fast identification of origins and cultivation patterns of Astragali Radix by dimension reduction algorithms of hyperspectral data].

Hong Jiang, Feixiang Zhou, Baolin Guo, Pan Cheng, Y. Liu, Mei-Hua Yang, Jiaoyang Luo
article en

Abstract

This study aims to establish a rapid and non-destructive method for recognizing the origins and cultivation patterns of Astragali Radix. A hyperspectral imaging system(spectral ranges: 400-1 000 nm, 900-1 700 nm; detection time: 15 s) was used to examine the samples of Astragali Radix with different origins and cultivation patterns. The collected hyperspectral datasets were highly correlated and numerous, which required the establishment of stable and reliable dimension reduction and classification models. Firstly, the original spectra were preprocessed by normalization, Gaussian smoothing, and masking. Then, principal component analysis(PCA), partial least squares-discriminant analysis(PLS-DA), and competitive adaptive reweighted sampling(CARS) were performed to reduce the dimension of the hyperspectral data. Finally, support vector machine(SVM), feedforward neural network(FFNN), and convolutional neural network(CNN) were used for data training of the spectral images and spectral curves with dimension reduction. The results showed that applying CARS as a variable selection method before PLS-DA on the hyperspectral data of Astragali Radix achieved the accuracy, precision, and recall of 100% on the CNN test dataset. The F_1-score and area under the curve of ROC(AUC) reached 1. This method is convenient, quick, sample-saving, and non-destructive, providing technical support for rapid identification of the origins and cultivation patterns of Astragali Radix.

PubMedVol. 49(24)
Chinese Academy of Medical Sciences & Peking Union Medical College (CN), WuXi AppTec (China) (CN), China People's Public Security University (CN), China Guangzhou Analysis and Testing Center (CN)
Traditional Chinese Medicine Studies
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