PMDC: Pancreas Segmentation with Mamba Block and Deformable 3D Convolution

Pancreas segmentation is a task traditionally hindered by the morphological complexity and variability of the pancreas. Transformers have excelled in capturing context information in medical images but are limited by computational resources. Recently, state space models (SSMs), especially Mamba, have demonstrated the ability to linearly scale with input sequences, surpassing transformers in long-sequence data analysis tasks and showing potential in visual tasks as well. Inspired by this, we propose a novel approach for pancreas segmentation using Mamba Block and deformable 3D convolution (PMDC). PMDC integrates Convolutional Neural Networks (CNN) and SSM, capturing both local fine-grained features and long-range dependencies through a Mamba-based U-Net architecture and leveraging deformable 3D convolutions (3DCN) to dynamically adapt to pancreatic shape variations. PMDC also ensures scalability and generalizability by self-configuring across different datasets. Experiments on NIH, MSD, and PancCT datasets demonstrate that PMDC outperforms existing CNNs and transformers, offering a robust solution for pancreas segmentation.

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Published
2024-12-03
DOI
https://doi.org/10.1109/bibm62325.2024.10822522
Citations
1
Primary Topic
Medical Image Segmentation Techniques
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article
Field-Weighted Citation Impact
0.25
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PMDC: Pancreas Segmentation with Mamba Block and Deformable 3D Convolution

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1 citations
Medical Image Segmentation Techniques
0.25
article

PMDC: Pancreas Segmentation with Mamba Block and Deformable 3D Convolution

Yang Liu, Tianyi Wang, Yiming Qin, Ziyao Meng, Hao Shen, Jie Dong, Haitao Song
article en
1 citations

Abstract

Pancreas segmentation is a task traditionally hindered by the morphological complexity and variability of the pancreas. Transformers have excelled in capturing context information in medical images but are limited by computational resources. Recently, state space models (SSMs), especially Mamba, have demonstrated the ability to linearly scale with input sequences, surpassing transformers in long-sequence data analysis tasks and showing potential in visual tasks as well. Inspired by this, we propose a novel approach for pancreas segmentation using Mamba Block and deformable 3D convolution (PMDC). PMDC integrates Convolutional Neural Networks (CNN) and SSM, capturing both local fine-grained features and long-range dependencies through a Mamba-based U-Net architecture and leveraging deformable 3D convolutions (3DCN) to dynamically adapt to pancreatic shape variations. PMDC also ensures scalability and generalizability by self-configuring across different datasets. Experiments on NIH, MSD, and PancCT datasets demonstrate that PMDC outperforms existing CNNs and transformers, offering a robust solution for pancreas segmentation.

Shanghai Jiao Tong University (CN), Nanjing General Hospital of Nanjing Military Command (CN), Beijing Academy of Artificial Intelligence (CN), Nanjing University (CN)
Zero hunger
Openalex Percentile: Top 42%
Medical Image Segmentation Techniques
0.25
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PMDC: Pancreas Segmentation with Mamba Block and Deformable 3D Convolution — Yang Liu, Tianyi Wang, et al. · (2024) | TGRS Research Map | TGRS