Hypergraph-based Self-supervised Multi-channel Network for Drug-target Interaction Prediction
Drug-target interaction (DTI) prediction is vital for drug discovery and repurposing. Hypergraph is utilized in DTI prediction for modeling higher-order relationships in biomedical networks. Although the strategies of modeling hypergraph-based drug-related interactions with multi-channel and utilizing self-supervised learning task to improve DTI prediction performance have been proven promising, current researches fail to effectively model feature interaction across different channels and fully exploit cross-channel information for self-supervised task. In this study, we propose a hypergraph-based self-supervised multi-channel interaction framework HSMI-DTI for DTI prediction. HSMI-DTI aims to extract hypergraph features effectively and model cross-channel correlations, leveraging hierarchical self-supervised learning to uncover the discover correlations between different channels. We compare HSMI-DTI with advanced baselines, and experiment results show our model outperforms existing methods, thereby optimizing DTI prediction performance.
Authors
- Baiying Lei (ORCID: https://orcid.org/0000-0002-3087-2550)
- Weilin Chen (ORCID: https://orcid.org/0000-0002-0335-4483)
- Peng Yang (ORCID: https://orcid.org/0000-0003-1113-7689)
- Liang Yu (ORCID: https://orcid.org/0009-0007-3922-3454)
- Xiaoting Zeng
Institutions
- Shenzhen University (CN)
- Shenzhen University Health Science Center (CN)
Publication Details
- Published
- 2024-12-03
- DOI
- https://doi.org/10.1109/bibm62325.2024.10821879
- Citations
- 2
- Primary Topic
- Computational Drug Discovery Methods
- Type
- article
- Field-Weighted Citation Impact
- 0.72