GPR-SCSANet: Unequal-Length Time Series Normalization with Split-Channel Residual Convolution and Self-Attention for Brain Age Prediction

Functional magnetic resonance imaging (fMRI), as a non-invasive method to reveal brain function alterations, frequently yields time series with unequal lengths in real-world scenarios, which may arise from factors such as motion artifacts, participant state, and differing scan protocols. This variability conflicts with the traditional methods relying on isometric inputs, which poses a significant challenge for the downstream applications such as brain age prediction. To address this challenge, we introduced Gaussian Process Regression (GPR) to normalize the length of time series and proposed split-channel residual convolution (SC) and self-attention mechanisms (SA) to perform brain age estimation, called GPR-SCSANet. Results showed that the proposed framework, GPR-SCSANet, is able to fully utilize the inherent information and learn richer feature representations from unequal-length fMRI time courses, which significantly improved the prediction accuracy across 3 brain atlases and 5 prediction models. The results demonstrated the effectiveness and robustness of the proposed GPR-SCSANet, showcasing the potential for broader applications in brain age prediction task.

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Published
2024-12-03
DOI
https://doi.org/10.1109/bibm62325.2024.10822453
Primary Topic
EEG and Brain-Computer Interfaces
Type
article
Field-Weighted Citation Impact
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article

GPR-SCSANet: Unequal-Length Time Series Normalization with Split-Channel Residual Convolution and Self-Attention for Brain Age Prediction

Rongtao Jiang, Shile Qi, Vince D. Calhoun, Tülay Adalı et al.
EEG and Brain-Computer Interfaces
article

GPR-SCSANet: Unequal-Length Time Series Normalization with Split-Channel Residual Convolution and Self-Attention for Brain Age Prediction

Rongtao Jiang, Shile Qi, Vince D. Calhoun, Tülay Adalı, Fangling Sun, Daoqiang Zhang, Chuang Liang
article en

Abstract

Functional magnetic resonance imaging (fMRI), as a non-invasive method to reveal brain function alterations, frequently yields time series with unequal lengths in real-world scenarios, which may arise from factors such as motion artifacts, participant state, and differing scan protocols. This variability conflicts with the traditional methods relying on isometric inputs, which poses a significant challenge for the downstream applications such as brain age prediction. To address this challenge, we introduced Gaussian Process Regression (GPR) to normalize the length of time series and proposed split-channel residual convolution (SC) and self-attention mechanisms (SA) to perform brain age estimation, called GPR-SCSANet. Results showed that the proposed framework, GPR-SCSANet, is able to fully utilize the inherent information and learn richer feature representations from unequal-length fMRI time courses, which significantly improved the prediction accuracy across 3 brain atlases and 5 prediction models. The results demonstrated the effectiveness and robustness of the proposed GPR-SCSANet, showcasing the potential for broader applications in brain age prediction task.

University of Maryland, Baltimore (US), Georgia Institute of Technology (US), Emory University (US), Georgia State University (US), Yale University (US), Center for Translational Research in Neuroimaging and Data Science (US), Nanjing University of Aeronautics and Astronautics (CN)
National Natural Science Foundation of China, Natural Science Foundation of Jiangsu Province, Fundamental Research Funds for the Central Universities
Openalex Percentile: Top 73%
EEG and Brain-Computer Interfaces
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