Logical Rules Enhanced Multimodal Reasoning Based on Biomedical Knowledge Graph

Biomedical knowledge graph reasoning is capable of discovering hidden new knowledge based on existing biomedical data, providing ideas and references for new drug discovery, disease research, and so on. The entire graph topology structure formed by triplets and the attribute descriptions for each entity are crucial information for discovering new knowledge. Some add a variety of additional information to aid reasoning, namely multimodal reasoning. However, current multimodal reasoning techniques often rely solely on vector space distance inferences based on triplets themselves, making it difficult to capture more complex relationships and dependencies between facts. This work integrated triplet entity relations, graph topology structures, and attribute descriptions for each entity to incorporate richer information, and utilized logical rules as external knowledge for relational reasoning in biomedical knowledge graphs. We have evaluated our approach on PharmKG.

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Published
2024-12-03
DOI
https://doi.org/10.1109/bibm62325.2024.10821810
Primary Topic
Biomedical Text Mining and Ontologies
Type
article
Field-Weighted Citation Impact
0.00

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article

Logical Rules Enhanced Multimodal Reasoning Based on Biomedical Knowledge Graph

Tao Song, Peifu Han, Jianmin Wang
Biomedical Text Mining and Ontologies
article

Logical Rules Enhanced Multimodal Reasoning Based on Biomedical Knowledge Graph

Tao Song, Peifu Han, Jianmin Wang
article en

Abstract

Biomedical knowledge graph reasoning is capable of discovering hidden new knowledge based on existing biomedical data, providing ideas and references for new drug discovery, disease research, and so on. The entire graph topology structure formed by triplets and the attribute descriptions for each entity are crucial information for discovering new knowledge. Some add a variety of additional information to aid reasoning, namely multimodal reasoning. However, current multimodal reasoning techniques often rely solely on vector space distance inferences based on triplets themselves, making it difficult to capture more complex relationships and dependencies between facts. This work integrated triplet entity relations, graph topology structures, and attribute descriptions for each entity to incorporate richer information, and utilized logical rules as external knowledge for relational reasoning in biomedical knowledge graphs. We have evaluated our approach on PharmKG.

Yonsei University (KR), China University of Petroleum, East China (CN)
National Natural Science Foundation of China, Innovation Fund, Technology Development
Openalex Percentile: Top 78%
Biomedical Text Mining and Ontologies
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