Polyp-E: Benchmarking the Robustness of Deep Segmentation Models via Polyp Editing

In daily clinical practice, clinicians exhibit robustness in identifying polyps with both location and size variations. It is uncertain if deep segmentation models can achieve comparable robustness in automated colonoscopic analysis. To benchmark the model robustness, we focus on evaluating the segmentation models on the polyps with various attributes (e.g. location and size) and healthy samples. Based on the Latent Diffusion Model, we perform attribute editing on real polyps and build a new dataset named Polyp-E. Our synthetic dataset boasts exceptional realism, to the extent that clinical experts find it challenging to discern them from real data. We evaluate various existing polyp segmentation models on the proposed benchmark. The results reveal most of the models are highly sensitive to attribute variations. As a novel data augmentation technique, the proposed editing pipeline can improve both in-distribution and out-ofdistribution generalization ability. The code and datasets has been released at https://github.com/RunpuWei/Polyp-E-Benchmark.

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Published
2024-12-03
DOI
https://doi.org/10.1109/bibm62325.2024.10822277
Primary Topic
Advanced Neural Network Applications
Type
article
Field-Weighted Citation Impact
0.00

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article

Polyp-E: Benchmarking the Robustness of Deep Segmentation Models via Polyp Editing

Runpu Wei, Chengwei Pan, Zhanyu Ma, Min Min et al.
Advanced Neural Network Applications
article

Polyp-E: Benchmarking the Robustness of Deep Segmentation Models via Polyp Editing

Runpu Wei, Chengwei Pan, Zhanyu Ma, Min Min, Kongming Liang, Zijin Yin, Yan Liu, Gang Yu, Haonan Huang
article en

Abstract

In daily clinical practice, clinicians exhibit robustness in identifying polyps with both location and size variations. It is uncertain if deep segmentation models can achieve comparable robustness in automated colonoscopic analysis. To benchmark the model robustness, we focus on evaluating the segmentation models on the polyps with various attributes (e.g. location and size) and healthy samples. Based on the Latent Diffusion Model, we perform attribute editing on real polyps and build a new dataset named Polyp-E. Our synthetic dataset boasts exceptional realism, to the extent that clinical experts find it challenging to discern them from real data. We evaluate various existing polyp segmentation models on the proposed benchmark. The results reveal most of the models are highly sensitive to attribute variations. As a novel data augmentation technique, the proposed editing pipeline can improve both in-distribution and out-ofdistribution generalization ability. The code and datasets has been released at https://github.com/RunpuWei/Polyp-E-Benchmark.

Beijing University of Posts and Telecommunications (CN), Chinese PLA General Hospital (CN), Children's Hospital of Zhejiang University (CN), Beihang University (CN)
National Natural Science Foundation of China
Openalex Percentile: Top 75%
Advanced Neural Network Applications
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Polyp-E: Benchmarking the Robustness of Deep Segmentation Models via Polyp Editing — Runpu Wei, Chengwei Pan, et al. · (2024) | TGRS Research Map | TGRS