Mitigating Feature Homogenization in Deep Graph Architectures for Clinical Data Representation

This research redefines International Classification of Diseases (ICD) coding as a sophisticated multi-label prediction problem, requiring the assignment of multiple codes to detailed discharge summaries. Current automated ICD coding techniques face challenges in effectively classifying medical diagnostic texts that involve complex and sparse label distributions, especially when model parameters are adjusted using traditional backpropagation methods. We present LGG-NRGrand, a novel adversarial framework that approaches ICD coding through the generation of labeled graphs. A significant challenge in this field is the widespread issue of Over-Smoothing in deep graph neural networks, which results in uniform or indistinct node representations. Our model is designed to improve the capacity for learning heterogeneous graph representations within a layered network architecture. Specifically, we introduce NRGrand, a single-relational deep graph neural network structure that mitigates the Over-Smoothing problem while capturing more detailed graph features during the representation learning phase. The LGG-NRGrand model is trained using an adversarial reinforcement framework, employing an adversarial domain adaptation technique. Experimental results indicate that LGG-NRGrand surpasses current methods on key evaluation metrics, including micro-F1, micro-AUC, and P@K.

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Publication Details

Published
2024-12-03
DOI
https://doi.org/10.1109/bibm62325.2024.10821868
Citations
3
Primary Topic
Advanced Graph Neural Networks
Type
article
Field-Weighted Citation Impact
1.04
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article

Mitigating Feature Homogenization in Deep Graph Architectures for Clinical Data Representation

Zhenghan Chen, Bolin Yang, Suyang Xi
3 citations
Advanced Graph Neural Networks
1.04
article

Mitigating Feature Homogenization in Deep Graph Architectures for Clinical Data Representation

Zhenghan Chen, Bolin Yang, Suyang Xi
article en
3 citations

Abstract

This research redefines International Classification of Diseases (ICD) coding as a sophisticated multi-label prediction problem, requiring the assignment of multiple codes to detailed discharge summaries. Current automated ICD coding techniques face challenges in effectively classifying medical diagnostic texts that involve complex and sparse label distributions, especially when model parameters are adjusted using traditional backpropagation methods. We present LGG-NRGrand, a novel adversarial framework that approaches ICD coding through the generation of labeled graphs. A significant challenge in this field is the widespread issue of Over-Smoothing in deep graph neural networks, which results in uniform or indistinct node representations. Our model is designed to improve the capacity for learning heterogeneous graph representations within a layered network architecture. Specifically, we introduce NRGrand, a single-relational deep graph neural network structure that mitigates the Over-Smoothing problem while capturing more detailed graph features during the representation learning phase. The LGG-NRGrand model is trained using an adversarial reinforcement framework, employing an adversarial domain adaptation technique. Experimental results indicate that LGG-NRGrand surpasses current methods on key evaluation metrics, including micro-F1, micro-AUC, and P@K.

Microsoft Research Asia (China) (CN), Xiamen University Malaysia (MY), University of Chinese Academy of Sciences (CN)
Openalex Percentile: Top 18%
Advanced Graph Neural Networks
1.04
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Mitigating Feature Homogenization in Deep Graph Architectures for Clinical Data Representation — Zhenghan Chen, Bolin Yang, et al. · (2024) | TGRS Research Map | TGRS