Systematic application of saliency maps to explain the decisions of convolutional neural networks for glaucoma diagnosis based on disc and cup geometry

This paper systematically evaluates saliency methods as explainability tools for convolutional neural networks trained to diagnose glaucoma using simplified eye fundus images that contain only disc and cup outlines. These simplified images, a methodological novelty, were used to relate features highlighted in the saliency maps to the geometrical clues that experts consider in glaucoma diagnosis. Despite their simplicity, these images retained sufficient information for accurate classification, with balanced accuracies ranging from 0.8331 to 0.8890, compared to 0.8090 to 0.9203 for networks trained on the original images. The study used a dataset of 606 images, along with RIM-ONE DL and REFUGE datasets, and explored nine saliency methods. A discretization algorithm was applied to reduce noise and compute normalized attribution values for standard eye fundus sectors. Consistent with other medical imaging studies, significant variability was found in the attribution maps, influenced by the method, model, or architecture, and often deviating from typical sectors experts examine. However, globally, the results were relatively stable, with a strong correlation of 0.9289 (<i>p</i> < 0.001) between relevant sectors in our dataset and RIM-ONE DL, and 0.7806 (<i>p</i> < 0.001) for REFUGE. The findings suggest caution when using saliency methods in critical fields like medicine. These methods may be more suitable for broad image relevance interpretation rather than assessing individual cases, where results are highly sensitive to methodological choices. Moreover, the regions identified by the networks do not consistently align with established medical criteria for disease severity.

Authors

Institutions

Publication Details

Journal
Biomedical Physics & Engineering Express
Published
2025-01-10
DOI
https://doi.org/10.1088/2057-1976/ada8ad
Citations
1
Primary Topic
Retinal Imaging and Analysis
Type
article
Field-Weighted Citation Impact
1.36

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Systematic application of saliency maps to explain the decisions of convolutional neural networks for glaucoma diagnosis based on disc and cup geometry

José Sigut, J.I. Estévez, Tinguaro Díaz-Alemán, Francisco Fumero
1 citations
Biomedical Physics & Engineering Express
Retinal Imaging and Analysis
1.36
article

Systematic application of saliency maps to explain the decisions of convolutional neural networks for glaucoma diagnosis based on disc and cup geometry

José Sigut, J.I. Estévez, Tinguaro Díaz-Alemán, Francisco Fumero
article en
1 citations

Abstract

This paper systematically evaluates saliency methods as explainability tools for convolutional neural networks trained to diagnose glaucoma using simplified eye fundus images that contain only disc and cup outlines. These simplified images, a methodological novelty, were used to relate features highlighted in the saliency maps to the geometrical clues that experts consider in glaucoma diagnosis. Despite their simplicity, these images retained sufficient information for accurate classification, with balanced accuracies ranging from 0.8331 to 0.8890, compared to 0.8090 to 0.9203 for networks trained on the original images. The study used a dataset of 606 images, along with RIM-ONE DL and REFUGE datasets, and explored nine saliency methods. A discretization algorithm was applied to reduce noise and compute normalized attribution values for standard eye fundus sectors. Consistent with other medical imaging studies, significant variability was found in the attribution maps, influenced by the method, model, or architecture, and often deviating from typical sectors experts examine. However, globally, the results were relatively stable, with a strong correlation of 0.9289 (<i>p</i> < 0.001) between relevant sectors in our dataset and RIM-ONE DL, and 0.7806 (<i>p</i> < 0.001) for REFUGE. The findings suggest caution when using saliency methods in critical fields like medicine. These methods may be more suitable for broad image relevance interpretation rather than assessing individual cases, where results are highly sensitive to methodological choices. Moreover, the regions identified by the networks do not consistently align with established medical criteria for disease severity.

Biomedical Physics & Engineering ExpressVol. 11(2)
Universidad de La Laguna (ES), Hospital Universitario de Canarias (ES)
Ministerio de Ciencia, Innovación y Universidades, Universidad de La Laguna
Openalex Percentile: Top 25%
Retinal Imaging and Analysis
1.36
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.