Respiratory Shedding of Infectious SARS-CoV-2 Omicron XBB.1.41.1 Lineage among Captive White-Tailed Deer, Texas, USA
White-tailed deer (Odocoileus virginianus) have high value for research, conservation, agriculture, and recreation and might be key SARS-CoV-2 reservoirs. In November 2023, we sampled 15 female deer in a captive facility in Texas, USA. All deer had neutralizing antibodies to SARS-CoV-2; respiratory swab samples from 11 deer were SARS-CoV-2-positive by quantitative reverse transcription PCR, and 1 deer also had a positive rectal swab sample. Six of the 11 respiratory swab samples yielded infectious virus; replication kinetics of most samples displayed lower growth 24-48 hours postinfection in vitro than Omicron lineages isolated from humans in Texas in the same period. Virus growth was similar between groups by 72 hours, suggesting no strong attenuation of deer-derived virus. All deer viruses clustered in XBB Omicron clade and demonstrated more mutations than expected compared with contemporaneous viruses in humans, suggesting that crossing the species barrier was accompanied by a high substitution rate.
Authors
- Tahmina Pervin (ORCID: https://orcid.org/0000-0002-0651-039X)
- Gabriel L. Hamer (ORCID: https://orcid.org/0000-0002-9829-788X)
- Sarah A. Hamer (ORCID: https://orcid.org/0000-0002-4955-048X)
- Logan F. Thomas (ORCID: https://orcid.org/0000-0003-2217-0476)
- Michael J. Cherry (ORCID: https://orcid.org/0000-0002-5771-0893)
- Benjamin W. Neuman (ORCID: https://orcid.org/0000-0003-1240-8954)
- Francisco C. Ferreira (ORCID: https://orcid.org/0000-0002-2034-4121)
- Joseph Hediger (ORCID: https://orcid.org/0009-0001-0339-6958)
- Wendy Tang (ORCID: https://orcid.org/0000-0003-0128-1476)
- Walter E. Cook
Publication Details
- Journal
- Emerging infectious diseases
- Published
- 2025-01-10
- DOI
- https://doi.org/10.3201/eid3102.241458
- Citations
- 1
- Primary Topic
- SARS-CoV-2 and COVID-19 Research
- Type
- article
- Field-Weighted Citation Impact
- 1.40
Funders
- U.S. Department of Agriculture
- National Institutes of Health
- Animal and Plant Health Inspection Service
- High Performance Research Computing, Texas A and M University
- National Institute of Allergy and Infectious Diseases