Prediction of transcript isoforms and identification of tissue-specific genes in cucumber
By analyzing thousands of published transcriptome data, we identified abundant transcriptional events and tissue-specific transcripts in cucumbers. This study presented here adds the great value to the public data and offers insights for further exploration of a more comprehensive tissue regulatory network in cucumber.
Authors
- Bin Liu (ORCID: https://orcid.org/0000-0002-0855-0213)
- Qi Gao (ORCID: https://orcid.org/0000-0003-3451-394X)
- Yuping Wei (ORCID: https://orcid.org/0000-0002-0069-3906)
- Wenjiao Wang (ORCID: https://orcid.org/0000-0001-8675-9007)
- Xuemei Wen (ORCID: https://orcid.org/0009-0006-1033-1710)
- Yushun Li (ORCID: https://orcid.org/0000-0002-1303-1581)
- Dailu Guan (ORCID: https://orcid.org/0000-0001-8800-3158)
- Chengcheng Shen (ORCID: https://orcid.org/0009-0003-5455-1975)
- Anqi Li (ORCID: https://orcid.org/0000-0002-3037-9483)
- Zhaoying Xu
Institutions
- Shanxi Agricultural University (CN)
- Xinjiang Academy of Agricultural Sciences (CN)
- University of California, Davis (US)
Publication Details
- Journal
- BMC Genomics
- Published
- 2025-01-10
- DOI
- https://doi.org/10.1186/s12864-025-11212-w
- Primary Topic
- Advances in Cucurbitaceae Research
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- National Natural Science Foundation of China
- Natural Science Foundation of Shanxi Province
- Shanxi Provincial Key Research and Development Project