RAPID: real-time automated plankton identification dashboard using Edge AI at sea

We describe RAPID: a Real-time Automated Plankton Identification Dashboard, deployed on the Plankton Imager, a high-speed line-scan camera that is connected to a ship water supply and captures images of particles in a flow-through system. This end-to-end pipeline for zooplankton data uses Edge AI equipped with a classification (ResNet) model that separates the images into three broad classes: Copepods, Non-Copepods zooplankton and Detritus. The results are transmitted and visualised on a terrestrial system in near real time. Over a 7-days survey, the Plankton Imager successfully imaged and saved 128 million particles of the mesozooplankton size range, 17 million of which were successfully processed in real-time via Edge AI. Data loss occurred along the real-time pipeline, mostly due to the processing limitation of the Edge AI system. Nevertheless, we found similar variability in the counts of the three classes in the output of the dashboard (after data loss) with that of the post-survey processing of the entire dataset. This concept offers a rapid and cost-effective method for the monitoring of trends and events at fine temporal and spatial scales, thus making the most of the continuous data collection in real time and allowing for adaptive sampling to be deployed. Given the rapid pace of improvement in AI tools, it is anticipated that it will soon be possible to deploy expanded classifiers on more performant computer processors. The use of imaging and AI tools is still in its infancy, with industrial and scientific applications of the concept presented therein being open-ended. Early results suggest that technological advances in this field have the potential to revolutionise how we monitor our seas.

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Publication Details

Journal
Frontiers in Marine Science
Published
2025-01-10
DOI
https://doi.org/10.3389/fmars.2024.1513463
Citations
2
Primary Topic
Marine and fisheries research
Type
article
Field-Weighted Citation Impact
2.21

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article

RAPID: real-time automated plankton identification dashboard using Edge AI at sea

Mojtaba Masoudi, Sarah L. C. Giering, Hayden Close, Eric Payne et al.
2 citations
Frontiers in Marine Science
Marine and fisheries research
2.21
article

RAPID: real-time automated plankton identification dashboard using Edge AI at sea

Mojtaba Masoudi, Sarah L. C. Giering, Hayden Close, Eric Payne, Noushin Eftekhari, Joseph Ribeiro, James D. Scott, Robert N. Blackwell, Sophie G. Pitois
article en
2 citations

Abstract

We describe RAPID: a Real-time Automated Plankton Identification Dashboard, deployed on the Plankton Imager, a high-speed line-scan camera that is connected to a ship water supply and captures images of particles in a flow-through system. This end-to-end pipeline for zooplankton data uses Edge AI equipped with a classification (ResNet) model that separates the images into three broad classes: Copepods, Non-Copepods zooplankton and Detritus. The results are transmitted and visualised on a terrestrial system in near real time. Over a 7-days survey, the Plankton Imager successfully imaged and saved 128 million particles of the mesozooplankton size range, 17 million of which were successfully processed in real-time via Edge AI. Data loss occurred along the real-time pipeline, mostly due to the processing limitation of the Edge AI system. Nevertheless, we found similar variability in the counts of the three classes in the output of the dashboard (after data loss) with that of the post-survey processing of the entire dataset. This concept offers a rapid and cost-effective method for the monitoring of trends and events at fine temporal and spatial scales, thus making the most of the continuous data collection in real time and allowing for adaptive sampling to be deployed. Given the rapid pace of improvement in AI tools, it is anticipated that it will soon be possible to deploy expanded classifiers on more performant computer processors. The use of imaging and AI tools is still in its infancy, with industrial and scientific applications of the concept presented therein being open-ended. Early results suggest that technological advances in this field have the potential to revolutionise how we monitor our seas.

Frontiers in Marine ScienceVol. 11
Centre for Environment, Fisheries and Aquaculture Science (GB), National Oceanography Centre (GB), The Alan Turing Institute (GB)
Centre for Environment, Fisheries and Aquaculture Science, Sight Research UK, Natural Environment Research Council
Life below water
Openalex Percentile: Top 16%
Marine and fisheries research
2.21
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