BiomiX, a user-friendly bioinformatic tool for democratized analysis and integration of multiomics data
The analysis of single-omics and multi-omics integration in a standalone tool, along with MOFA implementation and its interpretability via literature, represents significant progress in the multi-omics field in line with the "Findable, Accessible, Interoperable, and Reusable" data principles. BiomiX offers a wide range of parameters and interactive data visualization, allowing for personalized analysis tailored to user needs. This R-based, user-friendly tool is compatible with multiple operating systems and aims to make multi-omics analysis accessible to non-experts in bioinformatics.
Authors
- Cristian Iperi (ORCID: https://orcid.org/0009-0005-7474-041X)
- Anne Bordron (ORCID: https://orcid.org/0000-0002-7886-2546)
- Divi Cornec (ORCID: https://orcid.org/0000-0002-9159-702X)
- Nathan Foulquier (ORCID: https://orcid.org/0000-0003-4620-2794)
- Guillermo Barturen (ORCID: https://orcid.org/0000-0003-2103-1028)
- Éléonore Bettacchioli (ORCID: https://orcid.org/0009-0002-0797-8098)
- Marta E. Alarcón‐Riquelme (ORCID: https://orcid.org/0000-0002-7632-4154)
- Álvaro Fernández‐Ochoa (ORCID: https://orcid.org/0000-0001-5547-3209)
- Christophe Jamin (ORCID: https://orcid.org/0000-0002-9494-3223)
- Jacques‐Olivier Pers (ORCID: https://orcid.org/0000-0001-7287-5541)
Institutions
- Inserm (FR)
- Université de Bretagne Occidentale (FR)
- Universidad de Granada (ES)
- Karolinska Institutet (SE)
- Laboratoire des Sciences et Techniques de l’Information de la Communication et de la Connaissance (FR)
- Centre Hospitalier Régional Universitaire de Brest (FR)
- Pfizer-University of Granada-Junta de Andalucía Centre for Genomics and Oncological Research (ES)
- Hôpital Maison Blanche (FR)
Publication Details
- Journal
- BMC Bioinformatics
- Published
- 2025-01-10
- DOI
- https://doi.org/10.1186/s12859-024-06022-y
- Citations
- 7
- Primary Topic
- Metabolomics and Mass Spectrometry Studies
- Type
- article
- Field-Weighted Citation Impact
- 5.64
Funders
- European Federation of Pharmaceutical Industries and Associations
- European Commission
- Innovative Medicines Initiative
- Région Bretagne
- Agencia Estatal de Investigación