Whole genome sequence data of Trichoderma yunnanense strain TM10, a plant growth-promoting fungus and biocontrol agent

<i>Trichoderma yunnanense</i> strain TM10 was isolated from rhizosphere soil of rice plants cultivated under system of rice intensification (SRI) practises in West Java, Indonesia. It exhibits significant potential as a plant growth promoter and biocontrol agent in rice plants. Although this strain has shown promise in promoting plant growth and suppressing phytopathogens under <i>in vitro</i> and <i>in planta</i> conditions, there is still a lack of genomic data to elucidate the molecular mechanisms underlying its plant growth-promoting and biocontrol capabilities. This study reports the whole genome sequence of <i>T. yunnanense</i> strain TM10. The genome of the fungus was sequenced using the MGI DNBSEQ-G400 high-throughput sequencing platform. The assembled genome of <i>T. yunnanense</i> strain TM10 was approximately 36 Mbp in length, comprising 385 contigs with a GC content of 48 % and a sequencing coverage of 43.8×. This genomic data provides a foundation for harnessing the plant growth-promoting and biocontrol potential of this strain. The complete genome sequence has been deposited at the National Center for Biotechnology Information (NCBI) under Bioproject accession number PRJNA1181959, BioSample ID SAMN44575400, and genome accession number JBIYZQ000000000. These data are valuable for further research into the biotechnological potential of this strain and for exploring the molecular mechanisms underlying its plant growth-promoting and biocontrol activities.

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Publication Details

Journal
Data in Brief
Published
2025-01-09
DOI
https://doi.org/10.1016/j.dib.2025.111283
Citations
8
Primary Topic
Plant-Microbe Interactions and Immunity
Type
article
Field-Weighted Citation Impact
14.00

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article

Whole genome sequence data of Trichoderma yunnanense strain TM10, a plant growth-promoting fungus and biocontrol agent

Mia Miranti, K. W. Teo, Febri Doni, Nurul Shamsinah Mohd Suhaimi et al.
8 citations
Data in Brief
Plant-Microbe Interactions and Immunity
14.00
article

Whole genome sequence data of Trichoderma yunnanense strain TM10, a plant growth-promoting fungus and biocontrol agent

Mia Miranti, K. W. Teo, Febri Doni, Nurul Shamsinah Mohd Suhaimi, Muhamad Shakirin Mispan, Ryan Chan, Dedat Prismantoro, Kah Ooi Chua, Thomas Argyarich Jefferson
article en
8 citations

Abstract

<i>Trichoderma yunnanense</i> strain TM10 was isolated from rhizosphere soil of rice plants cultivated under system of rice intensification (SRI) practises in West Java, Indonesia. It exhibits significant potential as a plant growth promoter and biocontrol agent in rice plants. Although this strain has shown promise in promoting plant growth and suppressing phytopathogens under <i>in vitro</i> and <i>in planta</i> conditions, there is still a lack of genomic data to elucidate the molecular mechanisms underlying its plant growth-promoting and biocontrol capabilities. This study reports the whole genome sequence of <i>T. yunnanense</i> strain TM10. The genome of the fungus was sequenced using the MGI DNBSEQ-G400 high-throughput sequencing platform. The assembled genome of <i>T. yunnanense</i> strain TM10 was approximately 36 Mbp in length, comprising 385 contigs with a GC content of 48 % and a sequencing coverage of 43.8×. This genomic data provides a foundation for harnessing the plant growth-promoting and biocontrol potential of this strain. The complete genome sequence has been deposited at the National Center for Biotechnology Information (NCBI) under Bioproject accession number PRJNA1181959, BioSample ID SAMN44575400, and genome accession number JBIYZQ000000000. These data are valuable for further research into the biotechnological potential of this strain and for exploring the molecular mechanisms underlying its plant growth-promoting and biocontrol activities.

Data in BriefVol. 58
Universiti Sains Islam Malaysia (MY), Center for Global Development (US), Cornell University (US), University of Malaya (MY), Padjadjaran University (ID)
Cornell University, Kementerian Riset, Teknologi dan Pendidikan Tinggi, Universitas Padjadjaran, Kementerian Pendidikan, Kebudayaan, Riset, dan Teknologi
Zero hunger
Openalex Percentile: Top 1%
Plant-Microbe Interactions and Immunity
14.00
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